Description

Ensembl ID Os07g0485400 Gene ID Accession -
Symbol Alias - Full Name Similar to asparaginyl-tRNA synthetase
Status Confidence Length 6407 bases Strand Plus strand
Position 7 : 17838560 - 17844966 RNA binding domain tRNA-synt_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Os07t0485400-01 tRNA-synt_2 PF00152 6.2e-26 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Os07t0485400-01 2356 219aa Os07t0485400-01

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Os07g0485400oryza_sativaOs12t0414500-0118.861813.4959oryza_sativaOs07t0485400-0152.96837.8995
Os07g0485400oryza_sativaOs01t0372700-0126.29720.5725oryza_sativaOs07t0485400-0167.123352.5114
Os07g0485400oryza_sativaOs02t0686400-0115.84710.5647oryza_sativaOs07t0485400-0139.72626.484
Os07g0485400oryza_sativaOs02t0139600-0123.512714.1643oryza_sativaOs07t0485400-0137.899522.8311
Os07g0485400oryza_sativaOs01t0153400-013.385421.82292oryza_sativaOs07t0485400-015.936073.19635
Os07g0485400oryza_sativaOs02t0623500-0111.09215.80205oryza_sativaOs07t0485400-0129.680415.5251
Os07g0485400oryza_sativaOs03t0586800-0211.12966.47841oryza_sativaOs07t0485400-0130.593617.8082

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Os07g0485400oryza_sativaOs07t0485400-0182.191868.4931physcomitrium_patensPp3c1_35170V3.429.556724.6305
Os07g0485400oryza_sativaOs07t0485400-0181.735271.6895papaver_somniferumRZC7774630.650726.8836
Os07g0485400oryza_sativaOs07t0485400-0181.735271.2329papaver_somniferumRZC8285330.915426.943
Os07g0485400oryza_sativaOs07t0485400-0184.931573.9726cannabis_sativa_femalecds.evm.model.05.212933.634729.2948
Os07g0485400oryza_sativaOs07t0485400-0182.648472.1461ficus_caricaFCD_00006639-RA:cds33.456629.2052
Os07g0485400oryza_sativaOs07t0485400-0181.278572.6027beta_vulgarisKMT0229031.010527.7003
Os07g0485400oryza_sativaOs07t0485400-0184.018373.0594citrullus_lanatusCla97C10G187240.132.798628.5205
Os07g0485400oryza_sativaOs07t0485400-0184.018373.0594theobroma_cacaoEOY2433432.280728.0702
Os07g0485400oryza_sativaOs07t0485400-0183.561673.0594cucumis_meloMELO3C013939.2.132.562328.4698
Os07g0485400oryza_sativaOs07t0485400-0169.86357.0776chondrus_crispusCDF3372628.12522.9779
Os07g0485400oryza_sativaOs07t0485400-0184.018374.4292cucumis_sativusKGN5586232.740229.0036
Os07g0485400oryza_sativaOs07t0485400-0183.561674.8858populus_trichocarpaPotri.007G129800.7.v4.131.660928.3737
Os07g0485400oryza_sativaOs07t0485400-0182.191873.516populus_trichocarpaPotri.017G028800.6.v4.131.358928.0488
Os07g0485400oryza_sativaOs07t0485400-0181.735273.9726arabidopsis_thalianaAT4G17300.230.49427.598
Os07g0485400oryza_sativaOs07t0485400-0181.278569.4064marchantia_polymorphaPTQ3754527.987423.8994
Os07g0485400oryza_sativaOs07t0485400-0181.735270.7763brassica_junceacds.BjuB05g46730S31.625427.3852
Os07g0485400oryza_sativaOs07t0485400-0181.735271.6895brassica_junceacds.BjuA01g27030S31.79427.8863
Os07g0485400oryza_sativaOs07t0485400-0182.191873.516brassica_junceacds.BjuA08g11180S30.612227.381
Os07g0485400oryza_sativaOs07t0485400-0182.191873.516brassica_napusCDY5817432.028528.6477
Os07g0485400oryza_sativaOs07t0485400-0181.278571.2329brassica_napusCDY3558331.785727.8571
Os07g0485400oryza_sativaOs07t0485400-0181.735273.0594brassica_napusCDY5013431.850528.4698
Os07g0485400oryza_sativaOs07t0485400-0181.735271.6895brassica_napusCDY4297831.79427.8863
Os07g0485400oryza_sativaOs07t0485400-0184.018374.8858prunus_dulcisVVA3455031.345827.9387
Os07g0485400oryza_sativaOs07t0485400-0184.018374.8858prunus_persicaONI0661231.778928.3247
Os07g0485400oryza_sativaOs07t0485400-0181.278572.1461cajanus_cajanC.cajan_01537.t32.90229.2052
Os07g0485400oryza_sativaOs07t0485400-0184.474974.4292malus_domestica_goldenmRNA:MD06G004920032.570428.6972
Os07g0485400oryza_sativaOs07t0485400-0182.191873.516lupinus_angustifoliusOIV9406834.090930.4924
Os07g0485400oryza_sativaOs07t0485400-0182.191873.516medicago_truncatulaAES9090732.96729.4872
Os07g0485400oryza_sativaOs07t0485400-0183.10573.9726pisum_sativumPsat4g072280.1.cds33.579329.8893
Os07g0485400oryza_sativaOs07t0485400-0182.191872.6027phaseolus_vulgarisESW2765332.906829.0676
Os07g0485400oryza_sativaOs07t0485400-0183.561674.8858vigna_unguiculataVigun03g302900.3.v1.232.105328.7719
Os07g0485400oryza_sativaOs07t0485400-0184.018375.7991glycine_maxKRH0413233.454530.1818
Os07g0485400oryza_sativaOs07t0485400-0184.018375.3425glycine_maxKRH5740533.393829.9456
Os07g0485400oryza_sativaOs07t0485400-0183.10573.9726vigna_angularisKOM3258033.272429.6161
Os07g0485400oryza_sativaOs07t0485400-0183.10573.516manihot_esculentaOAY6003131.542527.9029
Os07g0485400oryza_sativaOs07t0485400-0184.931573.9726capsicum_annuumPHT8785733.756829.4011
Os07g0485400oryza_sativaOs07t0485400-0183.10572.6027solanum_lycopersicumSolyc03g019940.3.130.434826.5886
Os07g0485400oryza_sativaOs07t0485400-0184.931573.9726solanum_tuberosumPGSC0003DMT40003934132.574428.3713
Os07g0485400oryza_sativaOs07t0485400-0183.561673.9726helianthus_annuusmRNA:HanXRQr2_Chr03g013216132.04928.3713
Os07g0485400oryza_sativaOs07t0485400-019.132424.10959helianthus_annuusmRNA:HanXRQr2_Chr10g044997112.04825.42169
Os07g0485400oryza_sativaOs07t0485400-0182.191869.863lactuca_sativacds-PLY99028.131.141926.4706
Os07g0485400oryza_sativaOs07t0485400-0189.497783.5616avena_sativa_sangAVESA.00010b.r2.2CG0277870.1.CDS35.963333.578
Os07g0485400oryza_sativaOs07t0485400-0187.214684.4749oryza_longistaminataKN540004.1_FGP00250.529148.9418
Os07g0485400oryza_sativaOs07t0485400-0193.150790.8676oryza_rufipogonORUFI07G14840.238.490637.5472
Os07g0485400oryza_sativaOs07t0485400-0189.497783.5616avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0000829.335.44333.0922
Os07g0485400oryza_sativaOs07t0485400-0190.41184.4749avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0000211.135.168732.8597
Os07g0485400oryza_sativaOs07t0485400-0190.41184.4749avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0002787.136.330333.945
Os07g0485400oryza_sativaOs07t0485400-0167.123363.0137oryza_punctataOPUNC07G13420.239.236.8
Os07g0485400oryza_sativaOs07t0485400-0189.954387.6712oryza_brachyanthaOB07G20560.146.352945.1765
Os07g0485400oryza_sativaOs07t0485400-0189.954384.0183secale_cerealeSECCE2Rv1G0092040.136.617134.2007
Os07g0485400oryza_sativaOs07t0485400-0189.041182.6484lolium_perennecds.KYUSt_chr2.2663636.111133.5185
Os07g0485400oryza_sativaOs07t0485400-0193.150785.8447setaria_italicaKQL2580637.090934.1818
Os07g0485400oryza_sativaOs07t0485400-0193.150785.8447setaria_viridisTKW3476237.090934.1818
Os07g0485400oryza_sativaOs07t0485400-0193.150785.8447sorghum_bicolorKXG3623236.956534.058
Os07g0485400oryza_sativaOs07t0485400-0190.41184.9315triticum_turgidumTRITD2Bv1G105400.438.596536.2573
Os07g0485400oryza_sativaOs07t0485400-0188.127983.105triticum_turgidumTRITD0Uv1G010890.245.411842.8235
Os07g0485400oryza_sativaOs07t0485400-0190.41184.9315triticum_aestivumTraesCS2D02G235900.137.358535.0943
Os07g0485400oryza_sativaOs07t0485400-0188.127983.105triticum_aestivumTraesCS2A02G231500.245.518942.9245
Os07g0485400oryza_sativaOs07t0485400-0190.41184.9315triticum_aestivumTraesCS2B02G255900.236.940334.7015
Os07g0485400oryza_sativaOs07t0485400-0192.694185.8447zea_maysZm00001eb105060_P00236.976334.2441
Os07g0485400oryza_sativaOs07t0485400-0192.694185.3881zea_maysZm00001eb321560_P00136.976334.0619
Os07g0485400oryza_sativaOs07t0485400-0184.018371.2329asparagus_officinalisONK5573533.333328.2609
Os07g0485400oryza_sativaOs07t0485400-0185.388171.2329ananas_comosusAco019619.1.mrna132.297126.943
Os07g0485400oryza_sativaOs07t0485400-0144.292229.2237drosophila_melanogasterFBpp008620521.08713.913
Os07g0485400oryza_sativaOs07t0485400-0190.41184.4749triticum_urartuTuG1812G0200002312.01.T0136.940334.5149
Os07g0485400oryza_sativaOs07t0485400-0145.205528.3105caenorhabditis_elegansY66D12A.23.123.684214.8325
Os07g0485400oryza_sativaOs07t0485400-0168.493162.5571brachypodium_distachyonKQK1621631.712528.9641
Os07g0485400oryza_sativaOs07t0485400-0156.164441.5525homo_sapiensENSP0000028103825.786219.0776
Os07g0485400oryza_sativaOs07t0485400-0183.10573.9726vitis_viniferaVitvi02g00558_P00131.164427.7397
Os07g0485400oryza_sativaOs07t0485400-0183.561673.0594amborella_trichopodaERM9403530.29826.4901
Os07g0485400oryza_sativaOs07t0485400-0183.561672.6027ipomoea_trilobaitb13g07650.t131.660927.5086
Os07g0485400oryza_sativaOs07t0485400-0182.648472.1461fraxinus_excelsiorFRAEX38873_v2_000316180.1.cds30.887426.9625
Os07g0485400oryza_sativaOs07t0485400-0124.200922.8311fraxinus_excelsiorFRAEX38873_v2_000026650.1.cds51.960849.0196
Os07g0485400oryza_sativaOs07t0485400-0100fraxinus_excelsiorFRAEX38873_v2_000065970.1.cds00
Os07g0485400oryza_sativaOs07t0485400-0194.977288.1279eragrostis_curvulaTVU3916222.857121.2088
Os07g0485400oryza_sativaOs07t0485400-0181.278572.1461arabis_alpinaKFK3218531.504427.9646
Os07g0485400oryza_sativaOs07t0485400-0183.561672.1461corylus_avellanaCav03g08610.t122.481619.4103
Os07g0485400oryza_sativaOs07t0485400-0181.735271.6895eutrema_salsugineumESQ5569831.737627.8369
Os07g0485400oryza_sativaOs07t0485400-0179.908771.6895chenopodium_quinoaAUR62007518-RA:cds34.313730.7843
Os07g0485400oryza_sativaOs07t0485400-0166.2162.1005chenopodium_quinoaAUR62042796-RA:cds33.256931.1927
Os07g0485400oryza_sativaOs07t0485400-0154.794550.6849chenopodium_quinoaAUR62044033-RA:cds39.735136.755
Os07g0485400oryza_sativaOs07t0485400-0190.867689.4977oryza_barthiiOBART07G14530.149.7549
Os07g0485400oryza_sativaOs07t0485400-0150.684931.5068saccharomyces_cerevisiaeYCR024C22.56114.0244
Os07g0485400oryza_sativaOs07t0485400-0181.735273.516arabidopsis_lyratascaffold_702731.131.569728.3951
Os07g0485400oryza_sativaOs07t0485400-0184.018371.2329musa_acuminataMa02_p20310.131.560926.7581
Os07g0485400oryza_sativaOs07t0485400-0193.150785.3881panicum_halliiPUZ7206636.889733.8156
Os07g0485400oryza_sativaOs07t0485400-0178.995463.0137chara_brauniiGBG7362619.953915.917
Os07g0485400oryza_sativaOs07t0485400-0182.191869.863kalanchoe_fedtschenkoiKaladp0048s0949.1.v1.130.150825.6281
Os07g0485400oryza_sativaOs07t0485400-0183.561672.1461pistacia_veracds-EVM0003889.137.119732.0487
Os07g0485400oryza_sativaOs07t0485400-0184.931572.1461dioscorea_rotundataDRNTG_24889.131.903927.1012
Os07g0485400oryza_sativaOs07t0485400-0190.41184.9315hordeum_vulgareHORVU.MOREX.r3.2HG0143570.137.009334.7664
Os07g0485400oryza_sativaOs07t0485400-0182.648472.6027citrus_clementinaESR5355032.149228.2416
Os07g0485400oryza_sativaOs07t0485400-0183.10573.516quercus_subercds-POF05566.131.542527.9029
Os07g0485400oryza_sativaOs07t0485400-0190.867689.4977oryza_glumipatulaOGLUM07G13590.149.7549
Os07g0485400oryza_sativaOs07t0485400-0184.018370.3196eucalyptus_grandisKCW7778729.346124.5614
Os07g0485400oryza_sativaOs07t0485400-0180.821969.863cynara_cardunculusKVH9194541.258735.6643
Os07g0485400oryza_sativaOs07t0485400-0184.018371.2329corymbia_citriodoracds-KAF8032820.132.224227.3205
Os07g0485400oryza_sativaOs07t0485400-0180.821972.1461quercus_lobataQL12p012112:mrna35.902632.0487
Os07g0485400oryza_sativaOs07t0485400-013.652972.28311quercus_lobataQL12p012099:mrna4.371582.73224
Os07g0485400oryza_sativaOs07t0485400-0174.885865.7534nymphaea_colorataNC12G0189690.1:cds24.961921.9178
Os07g0485400oryza_sativaOs07t0485400-0183.561675.3425rosa_chinensisPRQ4956332.446829.2553
Os07g0485400oryza_sativaOs07t0485400-014.566212.73973rosa_chinensisPRQ204649.615395.76923
Os07g0485400oryza_sativaOs07t0485400-0190.41184.4749triticum_dicoccoidesTRIDC2AG030470.340.162337.5254
Os07g0485400oryza_sativaOs07t0485400-0190.41184.9315triticum_dicoccoidesTRIDC2BG037250.142.217539.6588
Os07g0485400oryza_sativaOs07t0485400-0182.191870.7763olea_europaeaOE9A071474C131.858427.4336
Os07g0485400oryza_sativaOs07t0485400-0121.461216.895olea_europaeaOE9A063533C116.206912.7586
Os07g0485400oryza_sativaOs07t0485400-0182.191870.7763olea_europaeaOE9A097138C232.028527.5801
Os07g0485400oryza_sativaOs07t0485400-0163.926951.5982cyanidioschyzon_merolaeCMR205CT21.212117.1212
Os07g0485400oryza_sativaOs07t0485400-0182.648472.1461gossypium_raimondiiKJB3763031.698827.6708
Os07g0485400oryza_sativaOs07t0485400-0182.648472.1461trifolium_pratenseTp57577_TGAC_v2_mRNA3889133.518529.2593
Os07g0485400oryza_sativaOs07t0485400-0184.018372.6027corchorus_capsularisOMO5967132.055727.7003
Os07g0485400oryza_sativaOs07t0485400-0148.401833.3333ciona_savignyiENSCSAVP0000001911822.649615.5983
Os07g0485400oryza_sativaOs07t0485400-0181.735271.6895brassica_rapa_ro18A01p021680.1_BraROA.131.79427.8863
Os07g0485400oryza_sativaOs07t0485400-0181.735272.6027brassica_rapa_ro18A08g507420.1_BraROA.129.883126.5442
Os07g0485400oryza_sativaOs07t0485400-0189.954381.7352saccharum_spontaneumSspon.02G0035730-1B-mRNA-1:cds35.115931.9073
Os07g0485400oryza_sativaOs07t0485400-0193.150786.3014saccharum_spontaneumSspon.02G0035730-2C-mRNA-1:cds34.343431.8182
Os07g0485400oryza_sativaOs07t0485400-0193.150785.8447saccharum_spontaneumSspon.02G0035730-3D-mRNA-1:cds37.023634.1198
Os07g0485400oryza_sativaOs07t0485400-0166.2150.2283galdieria_sulphurariaEME3199925.438619.2982
Os07g0485400oryza_sativaOs07t0485400-0181.278571.2329brassica_oleraceaBo1g051790.131.785727.8571
Os07g0485400oryza_sativaOs07t0485400-0182.191873.516brassica_oleraceaBo8g047260.132.028528.6477
Os07g0485400oryza_sativaOs07t0485400-0190.867687.6712leersia_perrieriLPERR07G12130.145.642244.0367
Os07g0485400oryza_sativaOs07t0485400-0181.735273.0594arabidopsis_hallerig17138.t131.569728.2187
Os07g0485400oryza_sativaOs07t0485400-0181.735273.516camelina_sativaCsa12g048430.130.598327.5214
Os07g0485400oryza_sativaOs07t0485400-0181.735273.516camelina_sativaCsa10g028130.131.569728.3951
Os07g0485400oryza_sativaOs07t0485400-0181.735273.0594camelina_sativaCsa11g032400.131.569728.2187
Os07g0485400oryza_sativaOs07t0485400-0189.954384.4749aegilops_tauschiiAET2Gv20521700.839.437
Os07g0485400oryza_sativaOs07t0485400-0175.799157.5342ostreococcus_lucimarinusABO9939233.00225.0497
Os07g0485400oryza_sativaOs07t0485400-0176.255757.0776ostreococcus_lucimarinusABP0121437.276827.9018
Os07g0485400oryza_sativaOs07t0485400-0174.885873.0594oryza_indicaBGIOSGA025712-PA43.501342.4403
Os07g0485400oryza_sativaOs07t0485400-0183.561674.4292prunus_aviumPav_sc0000567.1_g570.1.mk:mrna30.704727.349
Os07g0485400oryza_sativaOs07t0485400-0183.561673.0594juglans_regiacds.Jr02_10620_p131.228727.3038
Os07g0485400oryza_sativaOs07t0485400-0181.278572.1461juglans_regiacds.Jr02_10630_p132.014428.4173
Os07g0485400oryza_sativaOs07t0485400-012.283110.913242coffea_canephoraCDP099705.050512.0202
Os07g0485400oryza_sativaOs07t0485400-0181.278575.3425coffea_canephoraCDP0996940.180637.246
Os07g0485400oryza_sativaOs07t0485400-0190.41184.4749digitaria_exilisDexi2A01G0026810.1:cds42.489339.6996
Os07g0485400oryza_sativaOs07t0485400-0193.150790.411oryza_meridionalisOMERI07G11250.136.106235.0442
Os07g0485400oryza_sativaOs07t0485400-0182.648473.9726actinidia_chinensisPSS1153530.67827.4576
Os07g0485400oryza_sativaOs07t0485400-0172.146162.1005daucus_carotaKZN0765630.152725.9542
Os07g0485400oryza_sativaOs07t0485400-0193.150784.9315echinochloa_crusgalliscaffold43.267.cds36.823133.574
Os07g0485400oryza_sativaOs07t0485400-0192.694185.3881echinochloa_crusgalliscaffold16.830.cds36.576633.6937
Os07g0485400oryza_sativaOs07t0485400-0192.694185.3881echinochloa_crusgalliscaffold27.85.cds36.576633.6937
Os07g0485400oryza_sativaOs07t0485400-0193.150790.411oryza_nivaraONIVA07G13100.138.563337.4291
Os07g0485400oryza_sativaOs07t0485400-0150.684943.8356vigna_radiataVradi07g12550.124.832221.4765

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005739- mitochondrion1RCAOryza_sativa(39947)Component

Expression