Description

Ensembl ID Os03g0452300 Gene ID Accession -
Symbol Alias - Full Name Ribosomal protein S5, bacterial-type domain containing protein
Status Confidence Length 3980 bases Strand Minus strand
Position 3 : 19413119 - 19417098 RNA binding domain Ribosomal_S5_C , Ribosomal_S5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Os03t0452300-01 Ribosomal_S5_C PF03719 2.1e-23 1
Os03t0452300-01 Ribosomal_S5 PF00333 7.4e-26 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Os03t0452300-01 1202 326aa Os03t0452300-01

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Os03g0452300

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Os03g0452300oryza_sativaOs03t0452300-0148.77326.6871chlamydomonas_reinhardtiiPNW7157623.625612.9272
Os03g0452300oryza_sativaOs03t0452300-0153.987742.9448physcomitrium_patensPp3c11_10680V3.460.068347.7816
Os03g0452300oryza_sativaOs03t0452300-0156.13544.7853physcomitrium_patensPp3c7_18380V3.462.457349.8294
Os03g0452300oryza_sativaOs03t0452300-0154.90844.7853physcomitrium_patensPp3c1_5050V3.461.301450
Os03g0452300oryza_sativaOs03t0452300-0165.950951.227papaver_somniferumRZC6534362.548.5465
Os03g0452300oryza_sativaOs03t0452300-0163.803750.9202papaver_somniferumRZC4654366.453753.0351
Os03g0452300oryza_sativaOs03t0452300-0159.202547.546cannabis_sativa_femalecds.evm.model.09.57073.38458.9354
Os03g0452300oryza_sativaOs03t0452300-0153.987741.1043ficus_caricaFCD_00012565-RA:cds55.87342.5397
Os03g0452300oryza_sativaOs03t0452300-0161.963247.2393beta_vulgarisKMT0464265.372249.8382
Os03g0452300oryza_sativaOs03t0452300-0162.883446.6258citrullus_lanatusCla97C01G022950.166.993549.6732
Os03g0452300oryza_sativaOs03t0452300-0163.190248.4663theobroma_cacaoEOY2820767.986852.1452
Os03g0452300oryza_sativaOs03t0452300-0163.803747.546cucumis_meloMELO3C007277.2.167.752450.4886
Os03g0452300oryza_sativaOs03t0452300-0137.116626.9939chondrus_crispusCCP3811969.142950.2857
Os03g0452300oryza_sativaOs03t0452300-0164.417249.0798cucumis_sativusKGN4923459.490145.3258
Os03g0452300oryza_sativaOs03t0452300-0161.963246.0123populus_trichocarpaPotri.004G045700.1.v4.164.951848.2315
Os03g0452300oryza_sativaOs03t0452300-0157.055243.2515populus_trichocarpaPotri.011G053900.1.v4.163.265347.9592
Os03g0452300oryza_sativaOs03t0452300-0160.736246.0123arabidopsis_thalianaAT2G33800.165.346549.505
Os03g0452300oryza_sativaOs03t0452300-0150.306742.3313marchantia_polymorphaPTQ4743852.733144.373
Os03g0452300oryza_sativaOs03t0452300-0161.349747.2393brassica_junceacds.BjuA04g21630S66.225250.9934
Os03g0452300oryza_sativaOs03t0452300-0161.963247.8528brassica_napusCDY3768567.109651.8272
Os03g0452300oryza_sativaOs03t0452300-0161.349747.2393brassica_napusCDY5721366.225250.9934
Os03g0452300oryza_sativaOs03t0452300-0163.190248.1595prunus_dulcisVVA2449866.025650.3205
Os03g0452300oryza_sativaOs03t0452300-0163.190248.1595prunus_persicaONI1047266.025650.3205
Os03g0452300oryza_sativaOs03t0452300-0162.269948.4663cajanus_cajanC.cajan_19948.t66.776351.9737
Os03g0452300oryza_sativaOs03t0452300-0162.883447.8528malus_domestica_goldenmRNA:MD10G024760066.34350.4854
Os03g0452300oryza_sativaOs03t0452300-0163.803746.9325lupinus_angustifoliusOIW2058166.88149.1961
Os03g0452300oryza_sativaOs03t0452300-0161.656445.3988lupinus_angustifoliusOIV9435766.118448.6842
Os03g0452300oryza_sativaOs03t0452300-0160.429446.0123medicago_truncatulaKEH3103565.016549.505
Os03g0452300oryza_sativaOs03t0452300-0158.895744.4785pisum_sativumPsat7g115360.1.cds61.146546.1783
Os03g0452300oryza_sativaOs03t0452300-0161.656448.1595phaseolus_vulgarisESW3133166.777452.1595
Os03g0452300oryza_sativaOs03t0452300-0161.349749.0798vigna_unguiculataVigun03g107400.1.v1.266.445253.1561
Os03g0452300oryza_sativaOs03t0452300-0161.656446.6258glycine_maxKRH2042163.607648.1013
Os03g0452300oryza_sativaOs03t0452300-0164.723949.0798glycine_maxKRH5007670.333353.3333
Os03g0452300oryza_sativaOs03t0452300-0161.042948.4663vigna_angularisKOM3102866.11352.4917
Os03g0452300oryza_sativaOs03t0452300-0136.196323.0061vigna_angularisKOM2872720.3812.9534
Os03g0452300oryza_sativaOs03t0452300-0126.993921.1656vigna_angularisKOM3777144.444434.8485
Os03g0452300oryza_sativaOs03t0452300-0164.417249.6933manihot_esculentaOAY2620968.627452.9412
Os03g0452300oryza_sativaOs03t0452300-0161.042948.4663capsicum_annuumPHT9044665.032751.634
Os03g0452300oryza_sativaOs03t0452300-0161.963247.8528solanum_lycopersicumSolyc02g078010.3.122.345117.2566
Os03g0452300oryza_sativaOs03t0452300-0162.269948.4663solanum_tuberosumPGSC0003DMT40007638966.557451.8033
Os03g0452300oryza_sativaOs03t0452300-0161.656447.546helianthus_annuusmRNA:HanXRQr2_Chr15g069831167.905452.3649
Os03g0452300oryza_sativaOs03t0452300-0162.269948.1595lactuca_sativacds-PLY65637.168.581153.0405
Os03g0452300oryza_sativaOs03t0452300-0186.196373.9264avena_sativa_sangAVESA.00010b.r2.4AG0576500.1.CDS86.461574.1538
Os03g0452300oryza_sativaOs03t0452300-0184.969373.3129avena_sativa_sangAVESA.00010b.r2.4CG1305640.1.CDS85.230873.5385
Os03g0452300oryza_sativaOs03t0452300-0151.22743.2515avena_sativa_sangAVESA.00010b.r2.4DG0721450.1.CDS.174.553662.9464
Os03g0452300oryza_sativaOs03t0452300-0184.049183.1288oryza_longistaminataKN543607.1_FGP00199.636498.5455
Os03g0452300oryza_sativaOs03t0452300-0195.705595.7055oryza_rufipogonORUFI03G23590.195.412895.4128
Os03g0452300oryza_sativaOs03t0452300-0186.196373.9264avena_sativa_ot3098cds.AVESA.00001b.r3.4Dg0000444.186.461574.1538
Os03g0452300oryza_sativaOs03t0452300-0186.196373.9264avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0000083.182.163770.4678
Os03g0452300oryza_sativaOs03t0452300-0184.969373.3129avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0002539.185.230873.5385
Os03g0452300oryza_sativaOs03t0452300-0196.31993.865oryza_punctataOPUNC03G21570.194.864192.4471
Os03g0452300oryza_sativaOs03t0452300-0192.024588.3436oryza_brachyanthaOB03G32080.191.185487.538
Os03g0452300oryza_sativaOs03t0452300-01100100oryza_glaberrimaORGLA03G0213600.1100100
Os03g0452300oryza_sativaOs03t0452300-0186.809874.8466lolium_perennecds.KYUSt_scaffold_1259.28086.809874.8466
Os03g0452300oryza_sativaOs03t0452300-0176.687170.2454setaria_italicaKQK8831591.911884.1912
Os03g0452300oryza_sativaOs03t0452300-0189.263882.5153setaria_viridisTKV9284488.719582.0122
Os03g0452300oryza_sativaOs03t0452300-0185.889676.3804sorghum_bicolorEER9392288.328178.5489
Os03g0452300oryza_sativaOs03t0452300-0181.901872.0859triticum_turgidumTRITD4Av1G126170.183.177673.2087
Os03g0452300oryza_sativaOs03t0452300-0183.128872.6994triticum_turgidumTRITD4Bv1G075100.384.423773.8318
Os03g0452300oryza_sativaOs03t0452300-0183.128873.0061triticum_aestivumTraesCS4D02G151500.484.423774.1433
Os03g0452300oryza_sativaOs03t0452300-0169.938761.0429triticum_aestivumTraesCS4A02G167000.180.851170.5674
Os03g0452300oryza_sativaOs03t0452300-0183.128872.6994triticum_aestivumTraesCS4B02G164800.384.423773.8318
Os03g0452300oryza_sativaOs03t0452300-0185.889676.6871zea_maysZm00001eb043240_P00387.578.125
Os03g0452300oryza_sativaOs03t0452300-0163.496950.9202asparagus_officinalisONK7493035.264128.2794
Os03g0452300oryza_sativaOs03t0452300-0167.177953.3742ananas_comosusAco010533.1.mrna170.645256.129
Os03g0452300oryza_sativaOs03t0452300-0167.484753.3742ananas_comosusAco031279.1.mrna170.287555.5911
Os03g0452300oryza_sativaOs03t0452300-0182.208672.3926triticum_urartuTuG1812G0400001578.01.T0183.489173.5202
Os03g0452300oryza_sativaOs03t0452300-0181.595171.4724brachypodium_distachyonKQK0318082.098871.9136
Os03g0452300oryza_sativaOs03t0452300-0161.349749.0798vitis_viniferaVitvi10g01767_P00158.823547.0588
Os03g0452300oryza_sativaOs03t0452300-0164.417250amborella_trichopodaERN1097368.627453.268
Os03g0452300oryza_sativaOs03t0452300-0163.803750ipomoea_trilobaitb15g23500.t167.313952.7508
Os03g0452300oryza_sativaOs03t0452300-0160.429446.9325fraxinus_excelsiorFRAEX38873_v2_000032940.1.cds64.802650.3289
Os03g0452300oryza_sativaOs03t0452300-0161.042948.4663fraxinus_excelsiorFRAEX38873_v2_000219380.1.cds65.460551.9737
Os03g0452300oryza_sativaOs03t0452300-0186.809879.1411eragrostis_curvulaTVU4643789.841381.9048
Os03g0452300oryza_sativaOs03t0452300-0161.656448.1595arabis_alpinaKFK3100665.901651.4754
Os03g0452300oryza_sativaOs03t0452300-0143.86530.3681corylus_avellanaCav02g29430.t1.cds153.558137.0787
Os03g0452300oryza_sativaOs03t0452300-0160.429448.773chenopodium_quinoaAUR62017033-RA:cds63.75451.4563
Os03g0452300oryza_sativaOs03t0452300-0160.122748.1595chenopodium_quinoaAUR62014837-RA:cds64.262351.4754
Os03g0452300oryza_sativaOs03t0452300-01100100oryza_barthiiOBART03G22990.1100100
Os03g0452300oryza_sativaOs03t0452300-0161.349746.9325arabidopsis_lyratafgenesh2_kg.4__1392__AT2G33800.165.789550.3289
Os03g0452300oryza_sativaOs03t0452300-0147.239337.1166arabidopsis_lyratafgenesh1_pg.C_scaffold_400011668.7554.0179
Os03g0452300oryza_sativaOs03t0452300-0163.496951.5337musa_acuminataMa05_p18200.168.54355.6291
Os03g0452300oryza_sativaOs03t0452300-0189.263881.5951panicum_halliiPUZ3822689.538581.8462
Os03g0452300oryza_sativaOs03t0452300-0156.748542.9448chara_brauniiGBG9020450.271738.0435
Os03g0452300oryza_sativaOs03t0452300-0162.883447.8528kalanchoe_fedtschenkoiKaladp0351s0006.1.v1.168.106351.8272
Os03g0452300oryza_sativaOs03t0452300-0164.110450.6135pistacia_veracds-EVM0030644.168.976954.4554
Os03g0452300oryza_sativaOs03t0452300-0140.797534.9693dioscorea_rotundataDRNTG_25525.183.12571.25
Os03g0452300oryza_sativaOs03t0452300-0163.803748.1595citrus_clementinaESR6260768.196751.4754
Os03g0452300oryza_sativaOs03t0452300-0151.533741.7178quercus_subercds-POE74223.179.620864.455
Os03g0452300oryza_sativaOs03t0452300-0199.693399.3865oryza_glumipatulaOGLUM03G23720.110099.6923
Os03g0452300oryza_sativaOs03t0452300-0161.349747.8528eucalyptus_grandisKCW7622764.724950.4854
Os03g0452300oryza_sativaOs03t0452300-0157.36245.3988cynara_cardunculusKVH8953966.077752.2968
Os03g0452300oryza_sativaOs03t0452300-0161.963249.0798corymbia_citriodoracds-KAF8031194.164.331250.9554
Os03g0452300oryza_sativaOs03t0452300-0162.269946.9325quercus_lobataQL05p041319:mrna65.273349.1961
Os03g0452300oryza_sativaOs03t0452300-0161.963248.773nicotiana_attenuataOIT2800968.013553.5354
Os03g0452300oryza_sativaOs03t0452300-0164.417251.8405nymphaea_colorataNC1G0134190.1:cds66.666753.6508
Os03g0452300oryza_sativaOs03t0452300-0164.110447.8528rosa_chinensisPRQ2896767.419450.3226
Os03g0452300oryza_sativaOs03t0452300-0182.515372.3926triticum_dicoccoidesTRIDC4AG026700.177.97168.4058
Os03g0452300oryza_sativaOs03t0452300-0183.128872.6994triticum_dicoccoidesTRIDC4BG025440.184.423773.8318
Os03g0452300oryza_sativaOs03t0452300-0162.269949.6933olea_europaeaOE9A114660C167.218553.6424
Os03g0452300oryza_sativaOs03t0452300-0133.435624.5399olea_europaeaOE9A006942C154.773940.201
Os03g0452300oryza_sativaOs03t0452300-0150.306738.3436olea_europaeaOE9A030035C149.249237.5375
Os03g0452300oryza_sativaOs03t0452300-0162.883449.3865gossypium_raimondiiKJB5753367.880853.3113
Os03g0452300oryza_sativaOs03t0452300-0163.803748.4663gossypium_raimondiiKJB6862869.333352.6667
Os03g0452300oryza_sativaOs03t0452300-0159.81645.092trifolium_pratenseTp57577_TGAC_v2_mRNA168986045.2308
Os03g0452300oryza_sativaOs03t0452300-0164.417248.1595corchorus_capsularisOMO7638969.536451.9868
Os03g0452300oryza_sativaOs03t0452300-0184.969377.3006eragrostis_tefEt_4B_037173.CDS87.936580
Os03g0452300oryza_sativaOs03t0452300-0184.662677.3006eragrostis_tefEt_4A_033023.CDS87.61980
Os03g0452300oryza_sativaOs03t0452300-0161.656447.546brassica_rapa_ro18A04p031610.1_BraROA.166.556351.3245
Os03g0452300oryza_sativaOs03t0452300-0188.036877.9141saccharum_spontaneumSspon.01G0021840-2B-mRNA-1:cds88.854578.6378
Os03g0452300oryza_sativaOs03t0452300-0187.730177.3006saccharum_spontaneumSspon.01G0021840-4D-mRNA-1:cds88.544978.0186
Os03g0452300oryza_sativaOs03t0452300-0176.687169.9387saccharum_spontaneumSspon.01G0021840-1A-mRNA-1:cds77.160570.3704
Os03g0452300oryza_sativaOs03t0452300-0147.239330.0613galdieria_sulphurariaEME2849031.174119.8381
Os03g0452300oryza_sativaOs03t0452300-0161.349747.546brassica_oleraceaBo4g182260.166.225251.3245
Os03g0452300oryza_sativaOs03t0452300-0185.276179.1411leersia_perrieriLPERR10G06700.186.604480.3738
Os03g0452300oryza_sativaOs03t0452300-0161.963246.6258arabidopsis_hallerig03284.t166.447450
Os03g0452300oryza_sativaOs03t0452300-0161.042946.0123camelina_sativaCsa07g007520.165.460549.3421
Os03g0452300oryza_sativaOs03t0452300-0162.269946.6258camelina_sativaCsa05g021480.131.182823.3487
Os03g0452300oryza_sativaOs03t0452300-0161.349746.9325camelina_sativaCsa16g007320.166.006650.495
Os03g0452300oryza_sativaOs03t0452300-0181.288371.1656aegilops_tauschiiAET4Gv20402300.285.483974.8387
Os03g0452300oryza_sativaOs03t0452300-0133.435628.2209ostreococcus_lucimarinusABO9969968.553557.8616
Os03g0452300oryza_sativaOs03t0452300-0133.435628.2209ostreococcus_lucimarinusABO9973068.553557.8616
Os03g0452300oryza_sativaOs03t0452300-0194.478593.2515oryza_indicaBGIOSGA010448-PA97.468496.2025
Os03g0452300oryza_sativaOs03t0452300-0162.883447.8528prunus_aviumPav_sc0001305.1_g800.1.mk:mrna65.705150
Os03g0452300oryza_sativaOs03t0452300-0163.496949.3865juglans_regiacds.Jr03_07440_p166.774251.9355
Os03g0452300oryza_sativaOs03t0452300-0163.190248.4663coffea_canephoraCDO9952067.10151.4658
Os03g0452300oryza_sativaOs03t0452300-0163.803756.135digitaria_exilisDexi9B01G0017640.1:cds84.210574.0891
Os03g0452300oryza_sativaOs03t0452300-0163.190255.8282digitaria_exilisDexi9A01G0017990.1:cds83.739873.9837
Os03g0452300oryza_sativaOs03t0452300-0194.785394.4785oryza_meridionalisOMERI03G20730.194.785394.4785
Os03g0452300oryza_sativaOs03t0452300-0157.055246.6258actinidia_chinensisPSS246296250.6667
Os03g0452300oryza_sativaOs03t0452300-0161.042947.2393daucus_carotaKZN1140663.782149.359
Os03g0452300oryza_sativaOs03t0452300-0188.650382.2086echinochloa_crusgalliscaffold61.63.cds88.379281.9572
Os03g0452300oryza_sativaOs03t0452300-0187.423380.0613echinochloa_crusgalliscaffold1.928.cds87.423380.0613
Os03g0452300oryza_sativaOs03t0452300-0185.889677.6074echinochloa_crusgalliscaffold187.63.cds87.579.0625
Os03g0452300oryza_sativaOs03t0452300-0199.693399.6933oryza_nivaraONIVA03G02600.199.693399.6933
Os03g0452300oryza_sativaOs03t0452300-0143.251534.6626vigna_radiataVradi07g16440.177.049261.7486

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression