RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	OSTLU_10314	Gene ID		Accession	-
Symbol		Alias	-	Full Name	predicted protein
Status	Confidence	Length	690 bases	Strand	Minus strand
Position	6 : 813035 - 813724	RNA binding domain	PseudoU_synth_2 , S4
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ABO96870	PseudoU_synth_2	PF00849	6.1e-18	1
ABO96870	S4	PF01479	5.4e-12	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ABO96870	690	230aa	ABO96870

Gene Model

Click here to download OSTLU_10314's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download OSTLU_10314's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OSTLU_10314

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OSTLU_10314

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression