Description

Ensembl ID ORUFI03G25020 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 16935 bases Strand Minus strand
Position 3 : 20231347 - 20248281 RNA binding domain ResIII , DEAD , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ORUFI03G25020 ResIII PF04851 1.1e-09 1
ORUFI03G25020 ResIII PF04851 1.1e-09 2
ORUFI03G25020 ResIII PF04851 1.1e-09 3
ORUFI03G25020 ResIII PF04851 1.2e-09 4
ORUFI03G25020 DEAD PF00270 2.1e-12 5
ORUFI03G25020 DEAD PF00270 2.1e-12 6
ORUFI03G25020 DEAD PF00270 2.2e-12 7
ORUFI03G25020 DEAD PF00270 2.3e-12 8
ORUFI03G25020 Ribonucleas_3_3 PF14622 5.3e-17 9
ORUFI03G25020 Ribonucleas_3_3 PF14622 5.4e-17 10
ORUFI03G25020 Ribonucleas_3_3 PF14622 6e-17 11
ORUFI03G25020 Ribonucleas_3_3 PF14622 7e-17 12
ORUFI03G25020 PAZ PF02170 1.7e-14 13
ORUFI03G25020 PAZ PF02170 1.7e-14 14
ORUFI03G25020 PAZ PF02170 1.8e-14 15
ORUFI03G25020 PAZ PF02170 2e-14 16
ORUFI03G25020 Dicer_dimer PF03368 1.2e-08 17
ORUFI03G25020 Dicer_dimer PF03368 1.3e-08 18
ORUFI03G25020 Ribonuclease_3 PF00636 2e-33 19
ORUFI03G25020 Ribonuclease_3 PF00636 2e-33 20
ORUFI03G25020 Ribonuclease_3 PF00636 2e-33 21
ORUFI03G25020 Ribonuclease_3 PF00636 2e-33 22
ORUFI03G25020 Ribonuclease_3 PF00636 2.1e-33 23
ORUFI03G25020 Ribonuclease_3 PF00636 2.1e-33 24
ORUFI03G25020 Ribonuclease_3 PF00636 2.3e-33 25
ORUFI03G25020 Ribonuclease_3 PF00636 2.3e-33 26

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ORUFI03G25020.1 3138 1045aa ORUFI03G25020.1
- ORUFI03G25020.2 3012 1003aa ORUFI03G25020.2
- ORUFI03G25020.3 2934 977aa ORUFI03G25020.3
- ORUFI03G25020.4 2913 970aa ORUFI03G25020.4

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ORUFI03G25020

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ORUFI03G25020

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression