Description

Ensembl ID ORUFI01G44580 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10233 bases Strand Minus strand
Position 1 : 36467213 - 36477445 RNA binding domain ResIII , DEAD , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ORUFI01G44580 ResIII PF04851 4.8e-09 1
ORUFI01G44580 ResIII PF04851 1.3e-08 2
ORUFI01G44580 ResIII PF04851 2.3e-08 3
ORUFI01G44580 DEAD PF00270 6.2e-08 4
ORUFI01G44580 DEAD PF00270 1.4e-07 5
ORUFI01G44580 DEAD PF00270 4e-07 6
ORUFI01G44580 Ribonucleas_3_3 PF14622 2.2e-26 7
ORUFI01G44580 Ribonucleas_3_3 PF14622 2.3e-26 8
ORUFI01G44580 Ribonucleas_3_3 PF14622 2.3e-26 9
ORUFI01G44580 PAZ PF02170 4.5e-13 10
ORUFI01G44580 PAZ PF02170 7.5e-13 11
ORUFI01G44580 PAZ PF02170 7.6e-13 12
ORUFI01G44580 PAZ PF02170 7.7e-13 13
ORUFI01G44580 Dicer_dimer PF03368 3.4e-21 14
ORUFI01G44580 Dicer_dimer PF03368 3.5e-21 15
ORUFI01G44580 Dicer_dimer PF03368 3.5e-21 16
ORUFI01G44580 Dicer_dimer PF03368 3.1e-20 17
ORUFI01G44580 Ribonuclease_3 PF00636 8.3e-49 18
ORUFI01G44580 Ribonuclease_3 PF00636 8.3e-49 19
ORUFI01G44580 Ribonuclease_3 PF00636 8.4e-49 20
ORUFI01G44580 Ribonuclease_3 PF00636 8.4e-49 21
ORUFI01G44580 Ribonuclease_3 PF00636 8.8e-49 22
ORUFI01G44580 Ribonuclease_3 PF00636 8.8e-49 23
ORUFI01G44580 Ribonuclease_3 PF00636 7.3e-16 24

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ORUFI01G44580.1 5098 1618aa ORUFI01G44580.1
- ORUFI01G44580.2 5062 1606aa ORUFI01G44580.2
- ORUFI01G44580.3 5014 1590aa ORUFI01G44580.3
- ORUFI01G44580.4 3622 1126aa ORUFI01G44580.4

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ORUFI01G44580

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ORUFI01G44580

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression