RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	OPUNC07G06380	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
Status	Confidence	Length	10464 bases	Strand	Minus strand
Position	7 : 5848822 - 5859285	RNA binding domain	CPSF_A
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OPUNC07G06380	CPSF_A	PF03178	9.5e-33	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OPUNC07G06380.1	4059	1352aa	OPUNC07G06380.1

Gene Model

Click here to download OPUNC07G06380's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download OPUNC07G06380's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OPUNC07G06380

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OPUNC07G06380

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression