RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	OPUNC06G25830	Gene ID		Accession	-
Symbol		Alias	-	Full Name	CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink).
Status	Confidence	Length	2494 bases	Strand	Plus strand
Position	6 : 34473567 - 34476060	RNA binding domain	cwf18
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OPUNC06G25830	cwf18	PF08315	1.7e-36	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OPUNC06G25830.1	1192	178aa	OPUNC06G25830.1

Gene Model

Click here to download OPUNC06G25830's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download OPUNC06G25830's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OPUNC06G25830

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OPUNC06G25830

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression