Description

Ensembl ID OPUNC04G16040 Gene ID Accession -
Symbol Alias - Full Name dicer-like 4
Status Confidence Length 15126 bases Strand Minus strand
Position 4 : 23317581 - 23332706 RNA binding domain ResIII , DEAD , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OPUNC04G16040 ResIII PF04851 6.6e-05 1
OPUNC04G16040 DEAD PF00270 1.3e-05 2
OPUNC04G16040 Ribonucleas_3_3 PF14622 1.1e-26 3
OPUNC04G16040 Ribonucleas_3_3 PF14622 1.3e-26 4
OPUNC04G16040 Ribonucleas_3_3 PF14622 1.3e-26 5
OPUNC04G16040 Ribonucleas_3_3 PF14622 1.4e-26 6
OPUNC04G16040 PAZ PF02170 8.6e-12 7
OPUNC04G16040 PAZ PF02170 9.2e-12 8
OPUNC04G16040 PAZ PF02170 9.3e-12 9
OPUNC04G16040 PAZ PF02170 9.7e-12 10
OPUNC04G16040 PAZ PF02170 9.8e-12 11
OPUNC04G16040 PAZ PF02170 1e-11 12
OPUNC04G16040 Dicer_dimer PF03368 1e-24 13
OPUNC04G16040 Dicer_dimer PF03368 1e-24 14
OPUNC04G16040 Dicer_dimer PF03368 1e-24 15
OPUNC04G16040 Dicer_dimer PF03368 1.1e-24 16
OPUNC04G16040 Dicer_dimer PF03368 1.1e-24 17
OPUNC04G16040 Dicer_dimer PF03368 1.2e-24 18
OPUNC04G16040 Ribonuclease_3 PF00636 7.1e-47 19
OPUNC04G16040 Ribonuclease_3 PF00636 7.1e-47 20
OPUNC04G16040 Ribonuclease_3 PF00636 7.6e-47 21
OPUNC04G16040 Ribonuclease_3 PF00636 7.6e-47 22
OPUNC04G16040 Ribonuclease_3 PF00636 7.8e-47 23
OPUNC04G16040 Ribonuclease_3 PF00636 7.8e-47 24
OPUNC04G16040 Ribonuclease_3 PF00636 8e-47 25
OPUNC04G16040 Ribonuclease_3 PF00636 8e-47 26
OPUNC04G16040 Ribonuclease_3 PF00636 2e-25 27
OPUNC04G16040 Ribonuclease_3 PF00636 2.1e-25 28

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OPUNC04G16040.1 4613 1536aa OPUNC04G16040.1
- OPUNC04G16040.2 4439 1478aa OPUNC04G16040.2
- OPUNC04G16040.3 4409 1468aa OPUNC04G16040.3
- OPUNC04G16040.4 4583 1526aa OPUNC04G16040.4
- OPUNC04G16040.5 4559 1518aa OPUNC04G16040.5
- OPUNC04G16040.6 4442 1479aa OPUNC04G16040.6

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OPUNC04G16040

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OPUNC04G16040

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression