Description

Ensembl ID OPUNC03G19630 Gene ID Accession -
Symbol Alias - Full Name nuclear RNA polymerase C2
Status Confidence Length 16185 bases Strand Plus strand
Position 3 : 17722579 - 17738763 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OPUNC03G19630 RNA_pol_Rpb2_1 PF04563 3.9e-46 1
OPUNC03G19630 RNA_pol_Rpb2_1 PF04563 4.1e-46 2
OPUNC03G19630 RNA_pol_Rpb2_1 PF04563 5.3e-42 3
OPUNC03G19630 RNA_pol_Rpb2_3 PF04565 2e-19 4
OPUNC03G19630 RNA_pol_Rpb2_3 PF04565 2.1e-19 5
OPUNC03G19630 RNA_pol_Rpb2_3 PF04565 2.1e-19 6
OPUNC03G19630 RNA_pol_Rpb2_7 PF04560 1.1e-32 7
OPUNC03G19630 RNA_pol_Rpb2_7 PF04560 1.2e-32 8
OPUNC03G19630 RNA_pol_Rpb2_7 PF04560 1.2e-32 9
OPUNC03G19630 RNA_pol_Rpb2_2 PF04561 3.3e-22 10
OPUNC03G19630 RNA_pol_Rpb2_2 PF04561 3.4e-22 11
OPUNC03G19630 RNA_pol_Rpb2_2 PF04561 3.4e-22 12
OPUNC03G19630 RNA_pol_Rpb2_6 PF00562 8.9e-107 13
OPUNC03G19630 RNA_pol_Rpb2_6 PF00562 4.8e-106 14
OPUNC03G19630 RNA_pol_Rpb2_6 PF00562 4.9e-106 15
OPUNC03G19630 RNA_pol_Rpb2_5 PF04567 6.3e-11 16
OPUNC03G19630 RNA_pol_Rpb2_5 PF04567 7e-11 17
OPUNC03G19630 RNA_pol_Rpb2_5 PF04567 2e-06 18

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OPUNC03G19630.1 4206 1096aa OPUNC03G19630.1
- OPUNC03G19630.2 4164 1082aa OPUNC03G19630.2
- OPUNC03G19630.3 4044 1042aa OPUNC03G19630.3

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OPUNC03G19630

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OPUNC03G19630

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression