Description

Ensembl ID OMERI05G04370 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 11765 bases Strand Minus strand
Position 5 : 3949168 - 3960932 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OMERI05G04370 PROCT PF08084 3.4e-50 1
OMERI05G04370 PROCT PF08084 5.3e-50 2
OMERI05G04370 PROCT PF08084 7.6e-50 3
OMERI05G04370 PROCT PF08084 8.8e-50 4
OMERI05G04370 PROCT PF08084 8.9e-50 5
OMERI05G04370 PRP8_domainIV PF12134 8.2e-128 6
OMERI05G04370 PRP8_domainIV PF12134 8.3e-128 7
OMERI05G04370 PRP8_domainIV PF12134 7.1e-125 8
OMERI05G04370 PRP8_domainIV PF12134 5.1e-103 9
OMERI05G04370 PRO8NT PF08082 3.5e-86 10
OMERI05G04370 PRO8NT PF08082 1.4e-85 11
OMERI05G04370 PRO8NT PF08082 1.6e-85 12
OMERI05G04370 PRO8NT PF08082 1.6e-85 13
OMERI05G04370 PRO8NT PF08082 1.7e-85 14
OMERI05G04370 U6-snRNA_bdg PF10596 1.6e-90 15
OMERI05G04370 U6-snRNA_bdg PF10596 1.6e-90 16
OMERI05G04370 U6-snRNA_bdg PF10596 1.8e-90 17
OMERI05G04370 U6-snRNA_bdg PF10596 1.9e-90 18
OMERI05G04370 PROCN PF08083 1.3e-231 19
OMERI05G04370 PROCN PF08083 1.3e-231 20
OMERI05G04370 PROCN PF08083 1.4e-231 21
OMERI05G04370 PROCN PF08083 1.5e-231 22
OMERI05G04370 PROCN PF08083 1.6e-101 23
OMERI05G04370 RRM_4 PF10598 3.8e-47 24
OMERI05G04370 RRM_4 PF10598 4e-47 25
OMERI05G04370 RRM_4 PF10598 4.3e-47 26
OMERI05G04370 RRM_4 PF10598 4.3e-47 27
OMERI05G04370 U5_2-snRNA_bdg PF10597 2.3e-61 28
OMERI05G04370 U5_2-snRNA_bdg PF10597 5.2e-54 29
OMERI05G04370 U5_2-snRNA_bdg PF10597 5.2e-54 30
OMERI05G04370 U5_2-snRNA_bdg PF10597 8.5e-24 31
OMERI05G04370 U5_2-snRNA_bdg PF10597 8.6e-24 32

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OMERI05G04370.1 7247 2214aa OMERI05G04370.1
- OMERI05G04370.2 7661 2352aa OMERI05G04370.2
- OMERI05G04370.3 7631 2342aa OMERI05G04370.3
- OMERI05G04370.4 7280 2225aa OMERI05G04370.4
- OMERI05G04370.5 3422 939aa OMERI05G04370.5

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OMERI05G04370

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OMERI05G04370

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression