RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	OGLUM05G00130	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Ribosomal L28 family
Status	Confidence	Length	2022 bases	Strand	Minus strand
Position	5 : 99780 - 101801	RNA binding domain	Ribosomal_L28
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OGLUM05G00130	Ribosomal_L28	PF00830	4.5e-19	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OGLUM05G00130.1	414	137aa	OGLUM05G00130.1

Gene Model

Click here to download OGLUM05G00130's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download OGLUM05G00130's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OGLUM05G00130

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OGLUM05G00130

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression