Description

Ensembl ID OE9A002451 Gene ID Accession -
Symbol Alias - Full Name Pentatricopeptide repeat-containing protein At3g18110, chloroplastic
Status Confidence Length 6983 bases Strand Minus strand
Position 3 : 12331399 - 12338381 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OE9A002451C1 PPR_3 PF13812 2e-91 1
OE9A002451C1 PPR_3 PF13812 2e-91 2
OE9A002451C1 PPR_3 PF13812 2e-91 3
OE9A002451C1 PPR_3 PF13812 2e-91 4
OE9A002451C1 PPR_3 PF13812 2e-91 5
OE9A002451C1 PPR_3 PF13812 2e-91 6
OE9A002451C1 PPR_3 PF13812 2e-91 7
OE9A002451C1 PPR_3 PF13812 2e-91 8
OE9A002451C1 PPR_long PF17177 1.5e-46 9
OE9A002451C1 PPR_long PF17177 1.5e-46 10
OE9A002451C1 PPR_long PF17177 1.5e-46 11
OE9A002451C1 PPR PF01535 3.4e-98 12
OE9A002451C1 PPR PF01535 3.4e-98 13
OE9A002451C1 PPR PF01535 3.4e-98 14
OE9A002451C1 PPR PF01535 3.4e-98 15
OE9A002451C1 PPR PF01535 3.4e-98 16
OE9A002451C1 PPR PF01535 3.4e-98 17
OE9A002451C1 PPR PF01535 3.4e-98 18
OE9A002451C1 PPR PF01535 3.4e-98 19
OE9A002451C1 PPR PF01535 3.4e-98 20
OE9A002451C1 PPR PF01535 3.4e-98 21
OE9A002451C1 PPR PF01535 3.4e-98 22
OE9A002451C1 PPR PF01535 3.4e-98 23
OE9A002451C1 PPR PF01535 3.4e-98 24
OE9A002451C2 PPR_3 PF13812 3.3e-91 1
OE9A002451C2 PPR_3 PF13812 3.3e-91 2
OE9A002451C2 PPR_3 PF13812 3.3e-91 3
OE9A002451C2 PPR_3 PF13812 3.3e-91 4
OE9A002451C2 PPR_3 PF13812 3.3e-91 5
OE9A002451C2 PPR_3 PF13812 3.3e-91 6
OE9A002451C2 PPR_3 PF13812 3.3e-91 7
OE9A002451C2 PPR_3 PF13812 3.3e-91 8
OE9A002451C2 PPR_long PF17177 2.3e-46 9
OE9A002451C2 PPR_long PF17177 2.3e-46 10
OE9A002451C2 PPR_long PF17177 2.3e-46 11
OE9A002451C2 PPR PF01535 8.6e-98 12
OE9A002451C2 PPR PF01535 8.6e-98 13
OE9A002451C2 PPR PF01535 8.6e-98 14
OE9A002451C2 PPR PF01535 8.6e-98 15
OE9A002451C2 PPR PF01535 8.6e-98 16
OE9A002451C2 PPR PF01535 8.6e-98 17
OE9A002451C2 PPR PF01535 8.6e-98 18
OE9A002451C2 PPR PF01535 8.6e-98 19
OE9A002451C2 PPR PF01535 8.6e-98 20
OE9A002451C2 PPR PF01535 8.6e-98 21
OE9A002451C2 PPR PF01535 8.6e-98 22
OE9A002451C2 PPR PF01535 8.6e-98 23
OE9A002451C2 PPR PF01535 8.6e-98 24
OE9A002451C3 PPR_3 PF13812 2e-90 1
OE9A002451C3 PPR_3 PF13812 2e-90 2
OE9A002451C3 PPR_3 PF13812 2e-90 3
OE9A002451C3 PPR_3 PF13812 2e-90 4
OE9A002451C3 PPR_3 PF13812 2e-90 5
OE9A002451C3 PPR_3 PF13812 2e-90 6
OE9A002451C3 PPR_3 PF13812 2e-90 7
OE9A002451C3 PPR_3 PF13812 2e-90 8
OE9A002451C3 PPR_long PF17177 1e-45 9
OE9A002451C3 PPR_long PF17177 1e-45 10
OE9A002451C3 PPR_long PF17177 1e-45 11
OE9A002451C3 PPR PF01535 1.9e-96 12
OE9A002451C3 PPR PF01535 1.9e-96 13
OE9A002451C3 PPR PF01535 1.9e-96 14
OE9A002451C3 PPR PF01535 1.9e-96 15
OE9A002451C3 PPR PF01535 1.9e-96 16
OE9A002451C3 PPR PF01535 1.9e-96 17
OE9A002451C3 PPR PF01535 1.9e-96 18
OE9A002451C3 PPR PF01535 1.9e-96 19
OE9A002451C3 PPR PF01535 1.9e-96 20
OE9A002451C3 PPR PF01535 1.9e-96 21
OE9A002451C3 PPR PF01535 1.9e-96 22
OE9A002451C3 PPR PF01535 1.9e-96 23
OE9A002451C3 PPR PF01535 1.9e-96 24

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OE9A002451T1 4095 1215aa OE9A002451C1
- OE9A002451T2 6155 1253aa OE9A002451C2
- OE9A002451T3 5302 1417aa OE9A002451C3

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OE9A002451

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OE9A002451

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression