Description

Ensembl ID OE9A001527 Gene ID Accession -
Symbol Alias - Full Name Pentatricopeptide repeat-containing protein At5g42310, chloroplastic
Status Confidence Length 5568 bases Strand Plus strand
Position 5 : 11509459 - 11515026 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OE9A001527C1 PPR_3 PF13812 1.3e-74 1
OE9A001527C1 PPR_3 PF13812 1.3e-74 2
OE9A001527C1 PPR_3 PF13812 1.3e-74 3
OE9A001527C1 PPR_3 PF13812 1.3e-74 4
OE9A001527C1 PPR_3 PF13812 1.3e-74 5
OE9A001527C1 PPR_3 PF13812 1.3e-74 6
OE9A001527C1 PPR_3 PF13812 1.3e-74 7
OE9A001527C1 PPR_long PF17177 6.9e-35 8
OE9A001527C1 PPR_long PF17177 6.9e-35 9
OE9A001527C1 PPR_long PF17177 6.9e-35 10
OE9A001527C1 PPR PF01535 8e-80 11
OE9A001527C1 PPR PF01535 8e-80 12
OE9A001527C1 PPR PF01535 8e-80 13
OE9A001527C1 PPR PF01535 8e-80 14
OE9A001527C1 PPR PF01535 8e-80 15
OE9A001527C1 PPR PF01535 8e-80 16
OE9A001527C1 PPR PF01535 8e-80 17
OE9A001527C1 PPR PF01535 8e-80 18
OE9A001527C1 PPR PF01535 8e-80 19
OE9A001527C1 PPR PF01535 8e-80 20
OE9A001527C1 PPR PF01535 8e-80 21
OE9A001527C2 PPR_3 PF13812 1.3e-74 1
OE9A001527C2 PPR_3 PF13812 1.3e-74 2
OE9A001527C2 PPR_3 PF13812 1.3e-74 3
OE9A001527C2 PPR_3 PF13812 1.3e-74 4
OE9A001527C2 PPR_3 PF13812 1.3e-74 5
OE9A001527C2 PPR_3 PF13812 1.3e-74 6
OE9A001527C2 PPR_3 PF13812 1.3e-74 7
OE9A001527C2 PPR_long PF17177 6.9e-35 8
OE9A001527C2 PPR_long PF17177 6.9e-35 9
OE9A001527C2 PPR_long PF17177 6.9e-35 10
OE9A001527C2 PPR PF01535 8e-80 11
OE9A001527C2 PPR PF01535 8e-80 12
OE9A001527C2 PPR PF01535 8e-80 13
OE9A001527C2 PPR PF01535 8e-80 14
OE9A001527C2 PPR PF01535 8e-80 15
OE9A001527C2 PPR PF01535 8e-80 16
OE9A001527C2 PPR PF01535 8e-80 17
OE9A001527C2 PPR PF01535 8e-80 18
OE9A001527C2 PPR PF01535 8e-80 19
OE9A001527C2 PPR PF01535 8e-80 20
OE9A001527C2 PPR PF01535 8e-80 21

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OE9A001527T1 3133 699aa OE9A001527C1
- OE9A001527T2 2768 699aa OE9A001527C2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OE9A001527

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OE9A001527

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression