Description

Ensembl ID OBART09G19110 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit
Status Confidence Length 14094 bases Strand Plus strand
Position 9 : 18209886 - 18223979 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OBART09G19110 RNA_pol_Rpb1_4 PF05000 1.1e-08 1
OBART09G19110 RNA_pol_Rpb1_4 PF05000 1.1e-08 2
OBART09G19110 RNA_pol_Rpb1_4 PF05000 1.1e-08 3
OBART09G19110 RNA_pol_Rpb1_1 PF04997 3.2e-11 4
OBART09G19110 RNA_pol_Rpb1_1 PF04997 3.3e-11 5
OBART09G19110 RNA_pol_Rpb1_1 PF04997 3.3e-11 6
OBART09G19110 RNA_pol_Rpb1_2 PF00623 2.5e-28 7
OBART09G19110 RNA_pol_Rpb1_2 PF00623 2.6e-28 8
OBART09G19110 RNA_pol_Rpb1_2 PF00623 2.6e-28 9
OBART09G19110 RNA_pol_Rpb1_3 PF04983 4.5e-21 10
OBART09G19110 RNA_pol_Rpb1_3 PF04983 4.5e-21 11
OBART09G19110 RNA_pol_Rpb1_3 PF04983 4.5e-21 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OBART09G19110.1 4368 1401aa OBART09G19110.1
- OBART09G19110.2 4643 1401aa OBART09G19110.2
- OBART09G19110.3 4290 1375aa OBART09G19110.3

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART09G19110

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART09G19110

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression