Description

Ensembl ID OBART08G03340 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit
Status Confidence Length 7544 bases Strand Minus strand
Position 8 : 2599609 - 2607152 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OBART08G03340 RNA_pol_Rpb1_4 PF05000 3.5e-39 1
OBART08G03340 RNA_pol_Rpb1_1 PF04997 2.3e-105 2
OBART08G03340 RNA_pol_Rpb1_5 PF04998 2.4e-105 3
OBART08G03340 RNA_pol_Rpb1_2 PF00623 1.5e-72 4
OBART08G03340 RNA_pol_Rpb1_3 PF04983 5.6e-48 5
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 6
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 7
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 8
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 9
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 10
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 11
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 12
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 13
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 14
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 15
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 16
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 17
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 18
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 19
OBART08G03340 RNA_pol_Rpb1_R PF05001 1e-08 20
OBART08G03340 RNA_pol_Rpb1_6 PF04992 1.5e-65 21
OBART08G03340 RNA_pol_Rpb1_7 PF04990 8.5e-54 22

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OBART08G03340.1 5367 1786aa OBART08G03340.1

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART08G03340

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART08G03340

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression