Description

Ensembl ID OBART06G09250 Gene ID Accession -
Symbol Alias - Full Name Alanyl-tRNA synthetase, class IIc
Status Confidence Length 6620 bases Strand Plus strand
Position 6 : 6870638 - 6877257 RNA binding domain tRNA-synt_2c , tRNA_SAD , DHHA1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OBART06G09250 tRNA-synt_2c PF01411 5.9e-194 1
OBART06G09250 tRNA-synt_2c PF01411 2.2e-181 2
OBART06G09250 tRNA-synt_2c PF01411 2.2e-181 3
OBART06G09250 tRNA_SAD PF07973 9e-18 4
OBART06G09250 tRNA_SAD PF07973 9.2e-18 5
OBART06G09250 DHHA1 PF02272 4e-23 6
OBART06G09250 DHHA1 PF02272 4.4e-23 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OBART06G09250.1 3243 954aa OBART06G09250.1
- OBART06G09250.2 3369 996aa OBART06G09250.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART06G09250

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART06G09250

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression