Description

Ensembl ID OBART02G05160 Gene ID Accession -
Symbol Alias - Full Name suppressor of abi3-5
Status Confidence Length 6525 bases Strand Minus strand
Position 2 : 3370517 - 3377041 RNA binding domain G-patch , OCRE , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OBART02G05160 G-patch PF01585 3e-13 1
OBART02G05160 G-patch PF01585 3.1e-13 2
OBART02G05160 G-patch PF01585 3.4e-13 3
OBART02G05160 OCRE PF17780 2.8e-19 4
OBART02G05160 OCRE PF17780 2.8e-19 5
OBART02G05160 OCRE PF17780 2.9e-19 6
OBART02G05160 RRM_1 PF00076 9e-32 7
OBART02G05160 RRM_1 PF00076 9e-32 8
OBART02G05160 RRM_1 PF00076 3.8e-27 9
OBART02G05160 RRM_1 PF00076 3.8e-27 10
OBART02G05160 RRM_1 PF00076 4.5e-27 11
OBART02G05160 RRM_1 PF00076 4.5e-27 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OBART02G05160.1 2910 969aa OBART02G05160.1
- OBART02G05160.2 2949 982aa OBART02G05160.2
- OBART02G05160.3 3123 1040aa OBART02G05160.3

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART02G05160

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
OBART02G05160

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression