RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	OBART01G39570	Gene ID		Accession	-
Symbol		Alias	-	Full Name	GA C20oxidase2
Status	Confidence	Length	3157 bases	Strand	Plus strand
Position	1 : 32476848 - 32480004	RNA binding domain	2OG-FeII_Oxy
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OBART01G39570	2OG-FeII_Oxy	PF03171	2.1e-29	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OBART01G39570.1	1645	389aa	OBART01G39570.1

Gene Model

Click here to download OBART01G39570's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download OBART01G39570's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OBART01G39570

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
OBART01G39570

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression