RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Ma05_g25310	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3434 bases	Strand	Minus strand
Position	CAJGYN010000005.1 : 37273384 - 37276817	RNA binding domain	OB_Dis3 , RNB
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Ma05_p25310	OB_Dis3	PF17849	4e-17	1
Ma05_p25310	RNB	PF00773	1.3e-92	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Ma05_t25310.1	2664	887aa	Ma05_p25310.1

Gene Model

Click here to download Ma05_g25310's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Ma05_g25310's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma05_g25310

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma05_g25310

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression