RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Ma04_g31990	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Ribonuclease II family protein
Status	Confidence	Length	14216 bases	Strand	Plus strand
Position	CAJGYN010000004.1 : 32150367 - 32164582	RNA binding domain	PIN_4 , OB_Dis3 , RNB
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Ma04_p31990	PIN_4	PF13638	1e-14	1
Ma04_p31990	OB_Dis3	PF17849	4e-17	2
Ma04_p31990	RNB	PF00773	3.4e-92	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Ma04_t31990.1	3343	934aa	Ma04_p31990.1

Gene Model

Click here to download Ma04_g31990's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Ma04_g31990's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma04_g31990

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma04_g31990

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression