RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Ma01_g19360	Gene ID		Accession	-
Symbol		Alias	-	Full Name	ARM repeat superfamily protein
Status	Confidence	Length	17511 bases	Strand	Minus strand
Position	CAJGYN010000001.1 : 14887080 - 14904590	RNA binding domain	Exportin-5 , Xpo1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Ma01_p19360	Exportin-5	PF19273	0	1
Ma01_p19360	Xpo1	PF08389	6.2e-25	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Ma01_t19360.1	4180	1204aa	Ma01_p19360.1

Gene Model

Click here to download Ma01_g19360's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Ma01_g19360's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma01_g19360

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma01_g19360

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression