RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Ma01_g09190	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	16531 bases	Strand	Plus strand
Position	CAJGYN010000001.1 : 6633275 - 6649805	RNA binding domain	RNA_pol , RPOL_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Ma01_p09190	RNA_pol	PF00940	3.8e-157	1
Ma01_p09190	RPOL_N	PF14700	4.4e-69	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Ma01_t09190.1	3442	809aa	Ma01_p09190.1

Gene Model

Click here to download Ma01_g09190's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Ma01_g09190's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma01_g09190

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ma01_g09190

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression