RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	MTR_0002s0800	Gene ID		Accession	-
Symbol		Alias	-	Full Name	50S ribosomal protein L2P
Status	Confidence	Length	951 bases	Strand	Minus strand
Position	scaffold0002 : 280819 - 281769	RNA binding domain	Ribosomal_S19 , Ribosomal_L2_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KEH17728	Ribosomal_S19	PF00203	6.9e-28	1
KEH17728	Ribosomal_L2_C	PF03947	7.8e-45	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KEH17728	651	216aa	KEH17728

Gene Model

Click here to download MTR_0002s0800's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MTR_0002s0800's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MTR_0002s0800

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MTR_0002s0800

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression