RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_WSBEiJ_G0030244 | Gene ID |
|
Accession |
- |
Symbol |
Tmf1 |
Alias |
- |
Full Name |
TATA element modulatory factor 1 |
Status |
Confidence |
Length |
32431 bases |
Strand |
Minus strand |
Position |
6 : 98187014 - 98219444 |
RNA binding domain |
TMF_TATA_bd , TMF_DNA_bd |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_WSBEiJ_P0077787 |
TMF_TATA_bd |
PF12325 |
3.3e-31 |
1 |
MGP_WSBEiJ_P0077787 |
TMF_DNA_bd |
PF12329 |
1.4e-20 |
2 |
MGP_WSBEiJ_P0077788 |
TMF_DNA_bd |
PF12329 |
9.2e-21 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tmf1-001 |
MGP_WSBEiJ_T0077787 |
5040 |
1091aa |
MGP_WSBEiJ_P0077787"/note="transcript_id=MGP_WSBEiJ_T0077787 |
- |
MGP_WSBEiJ_T0077788 |
3191 |
784aa |
MGP_WSBEiJ_P0077788"/note="transcript_id=MGP_WSBEiJ_T0077788 |
- |
MGP_WSBEiJ_T0077789 |
524 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0072311 | 20.829 | 8.80829 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 18.4235 | 7.79102 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071479 | 21.1001 | 7.30388 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 21.4482 | 7.42438 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0051806 | 15.546 | 6.41579 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 23.0981 | 9.53254 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0072188 | 14.8944 | 7.1785 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 35.5637 | 17.1402 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0029068 | 18.4853 | 8.02192 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 34.0055 | 14.7571 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0045923 | 19.2007 | 7.73241 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 20.2566 | 8.15765 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0088694 | 27.6867 | 12.5683 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 13.9322 | 6.32447 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0087918 | 13.9348 | 6.42419 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 27.0394 | 12.4656 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0029006 | 18.4043 | 7.44681 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 31.714 | 12.8323 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0028998 | 18.4021 | 7.31959 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 32.7223 | 13.0156 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0030402 | 22.2664 | 8.84692 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 20.5316 | 8.15765 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0026687 | 23.3941 | 10.0671 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 22.3648 | 9.6242 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0027253 | 21.4844 | 8.69141 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 20.165 | 8.15765 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0042352 | 19.0402 | 8.61713 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 33.8222 | 15.3071 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0029004 | 18.4992 | 7.39969 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 32.539 | 13.0156 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0029001 | 18.5376 | 7.46653 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 32.9972 | 13.2906 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0091675 | 20.2005 | 8.55821 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 24.0147 | 10.1742 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0086721 | 14.8109 | 6.76612 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 25.4812 | 11.6407 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0019074 | 22.007 | 9.15493 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 22.9148 | 9.53254 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0049054 | 17.8416 | 7.48373 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 30.1558 | 12.6489 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0038577 | 18.2996 | 6.84292 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 32.3556 | 12.099 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0091975 | 20.711 | 9.04173 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 24.5646 | 10.7241 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0030592 | 22.8453 | 10.5919 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 20.165 | 9.34922 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0029011 | 18.3179 | 7.27554 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 32.539 | 12.9239 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0030126 | 17.0907 | 7.63322 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 32.6306 | 14.5738 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0091831 | 17.4512 | 7.11825 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 27.8643 | 11.3657 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0029960 | 21.6369 | 9.40734 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 21.0816 | 9.1659 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0091636 | 19.4219 | 8.13008 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 19.7067 | 8.24931 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0061153 | 21.2613 | 9.81982 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 21.6315 | 9.99083 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0040654 | 5 | 1.66667 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 0.549954 | 0.183318 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0091267 | 12.2767 | 4.90308 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 29.6059 | 11.824 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0054151 | 16.3541 | 7.57689 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 19.9817 | 9.25756 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0039788 | 15.2279 | 6.98351 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 28.7809 | 13.1989 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0048163 | 15.1443 | 6.7203 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 29.3309 | 13.0156 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0029009 | 8.71795 | 3.58974 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 1.5582 | 0.641613 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0083731 | 14.7178 | 6.50113 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 29.8808 | 13.1989 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0082296 | 18.15 | 8 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 33.2722 | 14.6654 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0082295 | 18.15 | 8 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 33.2722 | 14.6654 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0057525 | 18.2895 | 8.08861 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 32.539 | 14.3905 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0038581 | 18.4046 | 7.46439 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 29.6059 | 12.0073 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0028690 | 9.74081 | 4.12988 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 31.3474 | 13.2906 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0091820 | 17.8976 | 7.33154 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 30.4308 | 12.4656 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079043 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 68.8359 | 67.5527 | mus_caroli | MGP_CAROLIEiJ_P0075146 | 95.9132 | 94.1252 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0079116 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 98.5335 | 98.4418 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078240 | 100 | 99.907 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0079058 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0079525 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0078679 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0078794 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0078682 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0079038 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 95.6004 | 93.8588 | rattus_norvegicus | ENSRNOP00000070908 | 95.4254 | 93.6871 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0078826 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0078642 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 99.6334 | 99.3584 | mus_spicilegus | ENSMSIP00000037937 | 99.6334 | 99.3584 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0079778 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 100 | 100 | mus_musculus | ENSMUSP00000093325 | 100 | 100 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 98.3501 | 97.6169 | mus_pahari | MGP_PahariEiJ_P0051345 | 98.2601 | 97.5275 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 99.725 | 99.725 | mus_musculus_pwkphj | MGP_PWKPhJ_P0078686 | 99.725 | 99.725 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 99.5417 | 99.45 | mus_spretus | MGP_SPRETEiJ_P0078204 | 99.633 | 99.5413 |
MGP_WSBEiJ_G0030244 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077787 | 99.6334 | 99.6334 | mus_musculus_casteij | MGP_CASTEiJ_P0079260 | 99.6334 | 99.6334 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |