Description

Ensembl ID MGP_WSBEiJ_G0030244 Gene ID Accession -
Symbol Tmf1 Alias - Full Name TATA element modulatory factor 1
Status Confidence Length 32431 bases Strand Minus strand
Position 6 : 98187014 - 98219444 RNA binding domain TMF_TATA_bd , TMF_DNA_bd
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_WSBEiJ_P0077787 TMF_TATA_bd PF12325 3.3e-31 1
MGP_WSBEiJ_P0077787 TMF_DNA_bd PF12329 1.4e-20 2
MGP_WSBEiJ_P0077788 TMF_DNA_bd PF12329 9.2e-21 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tmf1-001 MGP_WSBEiJ_T0077787 5040 1091aa MGP_WSBEiJ_P0077787"/note="transcript_id=MGP_WSBEiJ_T0077787
- MGP_WSBEiJ_T0077788 3191 784aa MGP_WSBEiJ_P0077788"/note="transcript_id=MGP_WSBEiJ_T0077788
- MGP_WSBEiJ_T0077789 524 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007231120.8298.80829mus_musculus_wsbeijMGP_WSBEiJ_P007778718.42357.79102
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007147921.10017.30388mus_musculus_wsbeijMGP_WSBEiJ_P007778721.44827.42438
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P005180615.5466.41579mus_musculus_wsbeijMGP_WSBEiJ_P007778723.09819.53254
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007218814.89447.1785mus_musculus_wsbeijMGP_WSBEiJ_P007778735.563717.1402
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002906818.48538.02192mus_musculus_wsbeijMGP_WSBEiJ_P007778734.005514.7571
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P004592319.20077.73241mus_musculus_wsbeijMGP_WSBEiJ_P007778720.25668.15765
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P008869427.686712.5683mus_musculus_wsbeijMGP_WSBEiJ_P007778713.93226.32447
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P008791813.93486.42419mus_musculus_wsbeijMGP_WSBEiJ_P007778727.039412.4656
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002900618.40437.44681mus_musculus_wsbeijMGP_WSBEiJ_P007778731.71412.8323
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002899818.40217.31959mus_musculus_wsbeijMGP_WSBEiJ_P007778732.722313.0156
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P003040222.26648.84692mus_musculus_wsbeijMGP_WSBEiJ_P007778720.53168.15765
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002668723.394110.0671mus_musculus_wsbeijMGP_WSBEiJ_P007778722.36489.6242
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002725321.48448.69141mus_musculus_wsbeijMGP_WSBEiJ_P007778720.1658.15765
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P004235219.04028.61713mus_musculus_wsbeijMGP_WSBEiJ_P007778733.822215.3071
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002900418.49927.39969mus_musculus_wsbeijMGP_WSBEiJ_P007778732.53913.0156
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002900118.53767.46653mus_musculus_wsbeijMGP_WSBEiJ_P007778732.997213.2906
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P009167520.20058.55821mus_musculus_wsbeijMGP_WSBEiJ_P007778724.014710.1742
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P008672114.81096.76612mus_musculus_wsbeijMGP_WSBEiJ_P007778725.481211.6407
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P001907422.0079.15493mus_musculus_wsbeijMGP_WSBEiJ_P007778722.91489.53254
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P004905417.84167.48373mus_musculus_wsbeijMGP_WSBEiJ_P007778730.155812.6489
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P003857718.29966.84292mus_musculus_wsbeijMGP_WSBEiJ_P007778732.355612.099
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P009197520.7119.04173mus_musculus_wsbeijMGP_WSBEiJ_P007778724.564610.7241
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P003059222.845310.5919mus_musculus_wsbeijMGP_WSBEiJ_P007778720.1659.34922
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002901118.31797.27554mus_musculus_wsbeijMGP_WSBEiJ_P007778732.53912.9239
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P003012617.09077.63322mus_musculus_wsbeijMGP_WSBEiJ_P007778732.630614.5738
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P009183117.45127.11825mus_musculus_wsbeijMGP_WSBEiJ_P007778727.864311.3657
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P002996021.63699.40734mus_musculus_wsbeijMGP_WSBEiJ_P007778721.08169.1659
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P009163619.42198.13008mus_musculus_wsbeijMGP_WSBEiJ_P007778719.70678.24931
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P006115321.26139.81982mus_musculus_wsbeijMGP_WSBEiJ_P007778721.63159.99083
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P004065451.66667mus_musculus_wsbeijMGP_WSBEiJ_P00777870.5499540.183318
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P009126712.27674.90308mus_musculus_wsbeijMGP_WSBEiJ_P007778729.605911.824
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P005415116.35417.57689mus_musculus_wsbeijMGP_WSBEiJ_P007778719.98179.25756
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P003978815.22796.98351mus_musculus_wsbeijMGP_WSBEiJ_P007778728.780913.1989
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P004816315.14436.7203mus_musculus_wsbeijMGP_WSBEiJ_P007778729.330913.0156
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P00290098.717953.58974mus_musculus_wsbeijMGP_WSBEiJ_P00777871.55820.641613
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P008373114.71786.50113mus_musculus_wsbeijMGP_WSBEiJ_P007778729.880813.1989
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P008229618.158mus_musculus_wsbeijMGP_WSBEiJ_P007778733.272214.6654
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P008229518.158mus_musculus_wsbeijMGP_WSBEiJ_P007778733.272214.6654
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P005752518.28958.08861mus_musculus_wsbeijMGP_WSBEiJ_P007778732.53914.3905
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P003858118.40467.46439mus_musculus_wsbeijMGP_WSBEiJ_P007778729.605912.0073
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P00286909.740814.12988mus_musculus_wsbeijMGP_WSBEiJ_P007778731.347413.2906
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P009182017.89767.33154mus_musculus_wsbeijMGP_WSBEiJ_P007778730.430812.4656

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0079043100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778768.835967.5527mus_caroliMGP_CAROLIEiJ_P007514695.913294.1252
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_ajMGP_AJ_P0079116100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778798.533598.4418mus_musculus_c3hhejMGP_C3HHeJ_P007824010099.907
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_balbcjMGP_BALBcJ_P0079058100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0079525100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_fvbnjMGP_FVBNJ_P0078679100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_dba2jMGP_DBA2J_P0078794100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0078682100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_akrjMGP_AKRJ_P0079038100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778795.600493.8588rattus_norvegicusENSRNOP0000007090895.425493.6871
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_lpjMGP_LPJ_P0078826100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_cbajMGP_CBAJ_P0078642100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778799.633499.3584mus_spicilegusENSMSIP0000003793799.633499.3584
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0079778100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P0077787100100mus_musculusENSMUSP00000093325100100
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778798.350197.6169mus_pahariMGP_PahariEiJ_P005134598.260197.5275
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778799.72599.725mus_musculus_pwkphjMGP_PWKPhJ_P007868699.72599.725
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778799.541799.45mus_spretusMGP_SPRETEiJ_P007820499.63399.5413
MGP_WSBEiJ_G0030244mus_musculus_wsbeijMGP_WSBEiJ_P007778799.633499.6334mus_musculus_casteijMGP_CASTEiJ_P007926099.633499.6334

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression