RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_WSBEiJ_G0029004 | Gene ID |
|
Accession |
- |
Symbol |
BC005561 |
Alias |
- |
Full Name |
cDNA sequence BC005561 |
Status |
Confidence |
Length |
14255 bases |
Strand |
Plus strand |
Position |
5 : 105416927 - 105431181 |
RNA binding domain |
Thoc2 , Tho2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_WSBEiJ_P0071759 |
Thoc2 |
PF11732 |
4e-33 |
1 |
MGP_WSBEiJ_P0071759 |
Tho2 |
PF11262 |
4.6e-98 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
BC005561-001 |
MGP_WSBEiJ_T0071759 |
5403 |
1587aa |
MGP_WSBEiJ_P0071759"/note="transcript_id=MGP_WSBEiJ_T0071759 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0029004 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.874 | 99.6219 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0072958 | 99.7483 | 99.4965 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.6849 | 99.1808 | mus_caroli | MGP_CAROLIEiJ_P0069436 | 99.6849 | 99.1808 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0073029 | 100 | 100 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0072609 | 100 | 100 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0072960 | 100 | 100 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.874 | 99.6219 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0073437 | 99.7483 | 99.4965 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0072605 | 100 | 100 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 99.937 | mus_musculus_dba2j | MGP_DBA2J_P0072697 | 100 | 99.937 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.874 | 99.6219 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0072606 | 99.7483 | 99.4965 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.874 | 99.6219 | mus_musculus_akrj | MGP_AKRJ_P0072956 | 99.7483 | 99.4965 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 98.4877 | 97.1645 | rattus_norvegicus | ENSRNOP00000087239 | 98.4877 | 97.1645 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.874 | 99.6219 | mus_musculus_lpj | MGP_LPJ_P0072752 | 99.7483 | 99.4965 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0072566 | 100 | 100 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.874 | 99.748 | mus_spicilegus | ENSMSIP00000005737 | 100 | 99.8738 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0073648 | 100 | 100 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.874 | 99.6219 | mus_musculus | ENSMUSP00000159241 | 99.7483 | 99.4965 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 98.6137 | 97.1014 | mus_pahari | MGP_PahariEiJ_P0032593 | 98.5516 | 97.0403 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 100 | 99.937 | mus_musculus_pwkphj | MGP_PWKPhJ_P0072624 | 100 | 99.937 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.937 | 99.748 | mus_spretus | MGP_SPRETEiJ_P0072102 | 99.8112 | 99.6224 |
MGP_WSBEiJ_G0029004 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071759 | 99.937 | 99.748 | mus_musculus_casteij | MGP_CASTEiJ_P0073159 | 99.8112 | 99.6224 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |