Description

Ensembl ID MGP_WSBEiJ_G0022820 Gene ID Accession -
Symbol Hnrnpm Alias - Full Name heterogeneous nuclear ribonucleoprotein M
Status Confidence Length 40431 bases Strand Minus strand
Position 17 : 33160760 - 33201190 RNA binding domain RRM_1 , HnRNP_M_NLS
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_WSBEiJ_P0045939 RRM_1 PF00076 9.5e-53 1
MGP_WSBEiJ_P0045939 RRM_1 PF00076 9.5e-53 2
MGP_WSBEiJ_P0045939 RRM_1 PF00076 9.5e-53 3
MGP_WSBEiJ_P0045939 HnRNP_M_NLS PF11532 1.7e-18 4
MGP_WSBEiJ_P0045936 RRM_1 PF00076 1.2e-52 1
MGP_WSBEiJ_P0045936 RRM_1 PF00076 1.2e-52 2
MGP_WSBEiJ_P0045936 RRM_1 PF00076 1.2e-52 3
MGP_WSBEiJ_P0045936 HnRNP_M_NLS PF11532 1.8e-18 4
MGP_WSBEiJ_P0045938 RRM_1 PF00076 1.2e-37 1
MGP_WSBEiJ_P0045938 RRM_1 PF00076 1.2e-37 2
MGP_WSBEiJ_P0045938 HnRNP_M_NLS PF11532 1.5e-18 3
MGP_WSBEiJ_P0045937 RRM_1 PF00076 1.5e-37 1
MGP_WSBEiJ_P0045937 RRM_1 PF00076 1.5e-37 2
MGP_WSBEiJ_P0045937 HnRNP_M_NLS PF11532 1.7e-18 3
MGP_WSBEiJ_P0045941 RRM_1 PF00076 9.6e-15 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Hnrnpm-001 MGP_WSBEiJ_T0045936 3935 729aa MGP_WSBEiJ_P0045936"/note="transcript_id=MGP_WSBEiJ_T0045936
- MGP_WSBEiJ_T0045937 2550 679aa MGP_WSBEiJ_P0045937"/note="transcript_id=MGP_WSBEiJ_T0045937
- MGP_WSBEiJ_T0045938 2428 640aa MGP_WSBEiJ_P0045938"/note="transcript_id=MGP_WSBEiJ_T0045938
- MGP_WSBEiJ_T0045939 2339 690aa MGP_WSBEiJ_P0045939"/note="transcript_id=MGP_WSBEiJ_T0045939
- MGP_WSBEiJ_T0045940 634 56aa MGP_WSBEiJ_P0045940"/note="transcript_id=MGP_WSBEiJ_T0045940
- MGP_WSBEiJ_T0045941 729 242aa MGP_WSBEiJ_P0045941"/note="transcript_id=MGP_WSBEiJ_T0045941
- MGP_WSBEiJ_T0045942 746 No protein -
- MGP_WSBEiJ_T0045943 636 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P005630967.681953.6379mus_musculus_wsbeijMGP_WSBEiJ_P004593654.869743.4842
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P005631666.352252.5157mus_musculus_wsbeijMGP_WSBEiJ_P004593628.943822.9081

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0046906100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P004593699.725799.4513mus_caroliMGP_CAROLIEiJ_P004400599.725799.4513
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_ajMGP_AJ_P0046886100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_c3hhejMGP_C3HHeJ_P0046580100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_balbcjMGP_BALBcJ_P0046845100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0047326100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_fvbnjMGP_FVBNJ_P0046589100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_dba2jMGP_DBA2J_P0046635100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0046577100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_akrjMGP_AKRJ_P0046841100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P004593698.765498.4911rattus_norvegicusENSRNOP0000003210899.310399.0345
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_lpjMGP_LPJ_P0046727100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_cbajMGP_CBAJ_P0046515100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P004593694.238794.1015mus_spicilegusENSMSIP0000000979389.220889.0909
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P004593610099.8628mus_musculus_nzohlltjMGP_NZOHlLtJ_P004742310099.8628
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculusENSMUSP00000120115100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P004593699.588599.3141mus_pahariMGP_PahariEiJ_P004356299.588599.3141
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P0045936100100mus_musculus_pwkphjMGP_PWKPhJ_P0046268100100
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P004593610099.8628mus_spretusMGP_SPRETEiJ_P004590910099.8628
MGP_WSBEiJ_G0022820mus_musculus_wsbeijMGP_WSBEiJ_P004593610099.8628mus_musculus_casteijMGP_CASTEiJ_P004668110099.8628

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression