RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_WSBEiJ_G0022331 | Gene ID |
|
Accession |
- |
Symbol |
Urb1 |
Alias |
- |
Full Name |
URB1 ribosome biogenesis 1 homolog (S. cerevisiae) |
Status |
Confidence |
Length |
58993 bases |
Strand |
Minus strand |
Position |
16 : 90819218 - 90878210 |
RNA binding domain |
Npa1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_WSBEiJ_P0044111 |
Npa1 |
PF11707 |
3e-83 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Urb1-001 |
MGP_WSBEiJ_T0044111 |
7344 |
2277aa |
MGP_WSBEiJ_P0044111"/note="transcript_id=MGP_WSBEiJ_T0044111 |
- |
MGP_WSBEiJ_T0044112 |
809 |
No protein |
- |
- |
MGP_WSBEiJ_T0044113 |
2183 |
No protein |
- |
- |
MGP_WSBEiJ_T0044114 |
1218 |
No protein |
- |
- |
MGP_WSBEiJ_T0044115 |
661 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0022331 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.8682 | 99.8243 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0045047 | 99.8682 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 98.1555 | 97.0575 | mus_caroli | MGP_CAROLIEiJ_P0042222 | 98.1555 | 97.0575 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus_aj | MGP_AJ_P0045030 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus_c3hhej | MGP_C3HHeJ_P0044743 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus_balbcj | MGP_BALBcJ_P0045004 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0045482 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus_fvbnj | MGP_FVBNJ_P0044759 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.3852 | 98.946 | mus_musculus_dba2j | MGP_DBA2J_P0044808 | 99.3852 | 98.946 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0044740 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.8682 | 99.7365 | mus_musculus_akrj | MGP_AKRJ_P0044999 | 99.8682 | 99.7365 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 94.686 | 90.9091 | rattus_norvegicus | ENSRNOP00000002851 | 94.6444 | 90.8692 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.8682 | 99.8243 | mus_musculus_lpj | MGP_LPJ_P0044881 | 99.8682 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.8682 | 99.7365 | mus_musculus_cbaj | MGP_CBAJ_P0044654 | 99.8682 | 99.7365 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.1217 | 98.5507 | mus_spicilegus | ENSMSIP00000020218 | 99.1217 | 98.5507 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0045542 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.9122 | 99.8243 | mus_musculus | ENSMUSP00000114717 | 99.9122 | 99.8243 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 96.8819 | 94.9056 | mus_pahari | MGP_PahariEiJ_P0029582 | 96.8819 | 94.9056 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.4291 | 98.9899 | mus_musculus_pwkphj | MGP_PWKPhJ_P0044447 | 99.4291 | 98.9899 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 98.946 | 98.3751 | mus_spretus | MGP_SPRETEiJ_P0044120 | 98.946 | 98.3751 |
MGP_WSBEiJ_G0022331 | mus_musculus_wsbeij | MGP_WSBEiJ_P0044111 | 99.2095 | 99.0777 | mus_musculus_casteij | MGP_CASTEiJ_P0044863 | 99.2095 | 99.0777 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |