Description

Ensembl ID MGP_WSBEiJ_G0016029 Gene ID Accession -
Symbol Tdrd5 Alias - Full Name tudor domain containing 5
Status Confidence Length 49243 bases Strand Minus strand
Position 1 : 159346465 - 159395707 RNA binding domain OST-HTH , TUDOR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_WSBEiJ_P0022114 OST-HTH PF12872 1.9e-30 1
MGP_WSBEiJ_P0022114 OST-HTH PF12872 1.9e-30 2
MGP_WSBEiJ_P0022114 OST-HTH PF12872 1.9e-30 3
MGP_WSBEiJ_P0022114 TUDOR PF00567 3.9e-20 4
MGP_WSBEiJ_P0022115 OST-HTH PF12872 3.9e-20 1
MGP_WSBEiJ_P0022115 OST-HTH PF12872 3.9e-20 2
MGP_WSBEiJ_P0022115 TUDOR PF00567 3.4e-20 3
MGP_WSBEiJ_P0022118 OST-HTH PF12872 1.9e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tdrd5-001 MGP_WSBEiJ_T0022114 3759 1040aa MGP_WSBEiJ_P0022114"/note="transcript_id=MGP_WSBEiJ_T0022114
- MGP_WSBEiJ_T0022115 3210 963aa MGP_WSBEiJ_P0022115"/note="transcript_id=MGP_WSBEiJ_T0022115
- MGP_WSBEiJ_T0022116 268 No protein -
- MGP_WSBEiJ_T0022117 3671 No protein -
- MGP_WSBEiJ_T0022118 618 195aa MGP_WSBEiJ_P0022118"/note="transcript_id=MGP_WSBEiJ_T0022118

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P005117523.293511.6041mus_musculus_wsbeijMGP_WSBEiJ_P002211426.2513.0769
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P006110638.214321.9643mus_musculus_wsbeijMGP_WSBEiJ_P002211420.576911.8269
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P004677517.93919.03981mus_musculus_wsbeijMGP_WSBEiJ_P002211436.826918.5577
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P006443320.554110.277mus_musculus_wsbeijMGP_WSBEiJ_P002211422.115411.0577

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.903899.9038mus_musculus_129s1svimjMGP_129S1SvImJ_P002279799.903899.9038
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211498.173197.5962mus_caroliMGP_CAROLIEiJ_P002053298.742798.1625
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_ajMGP_AJ_P002277499.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_c3hhejMGP_C3HHeJ_P002255299.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_balbcjMGP_BALBcJ_P002274399.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.903899.8077mus_musculus_c57bl6njMGP_C57BL6NJ_P002325699.903899.8077
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_fvbnjMGP_FVBNJ_P002262999.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_dba2jMGP_DBA2J_P002261999.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_nodshiltjMGP_NODShiLtJ_P002259599.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_akrjMGP_AKRJ_P002274299.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211494.807791.5385rattus_norvegicusENSRNOP0000000535394.263991.0134
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P0022114100100mus_musculus_lpjMGP_LPJ_P0022721100100
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.711599.6154mus_musculus_cbajMGP_CBAJ_P002249699.711599.6154
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.615499.1346mus_spicilegusENSMSIP0000001691391.762691.3198
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P0022114100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0023293100100
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.903899.8077mus_musculusENSMUSP0000013729899.903899.8077
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211495.865493.1731mus_pahariMGP_PahariEiJ_P007581095.589692.9051
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.807799.8077mus_musculus_pwkphjMGP_PWKPhJ_P002180699.807799.8077
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.519298.6538mus_spretusMGP_SPRETEiJ_P002159599.519298.6538
MGP_WSBEiJ_G0016029mus_musculus_wsbeijMGP_WSBEiJ_P002211499.903899.8077mus_musculus_casteijMGP_CASTEiJ_P002208399.903899.8077

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression