RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_WSBEiJ_G0016029 | Gene ID |
|
Accession |
- |
Symbol |
Tdrd5 |
Alias |
- |
Full Name |
tudor domain containing 5 |
Status |
Confidence |
Length |
49243 bases |
Strand |
Minus strand |
Position |
1 : 159346465 - 159395707 |
RNA binding domain |
OST-HTH , TUDOR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_WSBEiJ_P0022114 |
OST-HTH |
PF12872 |
1.9e-30 |
1 |
MGP_WSBEiJ_P0022114 |
OST-HTH |
PF12872 |
1.9e-30 |
2 |
MGP_WSBEiJ_P0022114 |
OST-HTH |
PF12872 |
1.9e-30 |
3 |
MGP_WSBEiJ_P0022114 |
TUDOR |
PF00567 |
3.9e-20 |
4 |
MGP_WSBEiJ_P0022115 |
OST-HTH |
PF12872 |
3.9e-20 |
1 |
MGP_WSBEiJ_P0022115 |
OST-HTH |
PF12872 |
3.9e-20 |
2 |
MGP_WSBEiJ_P0022115 |
TUDOR |
PF00567 |
3.4e-20 |
3 |
MGP_WSBEiJ_P0022118 |
OST-HTH |
PF12872 |
1.9e-10 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tdrd5-001 |
MGP_WSBEiJ_T0022114 |
3759 |
1040aa |
MGP_WSBEiJ_P0022114"/note="transcript_id=MGP_WSBEiJ_T0022114 |
- |
MGP_WSBEiJ_T0022115 |
3210 |
963aa |
MGP_WSBEiJ_P0022115"/note="transcript_id=MGP_WSBEiJ_T0022115 |
- |
MGP_WSBEiJ_T0022116 |
268 |
No protein |
- |
- |
MGP_WSBEiJ_T0022117 |
3671 |
No protein |
- |
- |
MGP_WSBEiJ_T0022118 |
618 |
195aa |
MGP_WSBEiJ_P0022118"/note="transcript_id=MGP_WSBEiJ_T0022118 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0051175 | 23.2935 | 11.6041 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 26.25 | 13.0769 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0061106 | 38.2143 | 21.9643 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 20.5769 | 11.8269 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0046775 | 17.9391 | 9.03981 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 36.8269 | 18.5577 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0064433 | 20.5541 | 10.277 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 22.1154 | 11.0577 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.9038 | 99.9038 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0022797 | 99.9038 | 99.9038 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 98.1731 | 97.5962 | mus_caroli | MGP_CAROLIEiJ_P0020532 | 98.7427 | 98.1625 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_aj | MGP_AJ_P0022774 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_c3hhej | MGP_C3HHeJ_P0022552 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_balbcj | MGP_BALBcJ_P0022743 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.9038 | 99.8077 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0023256 | 99.9038 | 99.8077 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_fvbnj | MGP_FVBNJ_P0022629 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_dba2j | MGP_DBA2J_P0022619 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0022595 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 94.8077 | 91.5385 | rattus_norvegicus | ENSRNOP00000005353 | 94.2639 | 91.0134 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0022721 | 100 | 100 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.7115 | 99.6154 | mus_musculus_cbaj | MGP_CBAJ_P0022496 | 99.7115 | 99.6154 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.6154 | 99.1346 | mus_spicilegus | ENSMSIP00000016913 | 91.7626 | 91.3198 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0023293 | 100 | 100 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.9038 | 99.8077 | mus_musculus | ENSMUSP00000137298 | 99.9038 | 99.8077 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 95.8654 | 93.1731 | mus_pahari | MGP_PahariEiJ_P0075810 | 95.5896 | 92.9051 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.8077 | 99.8077 | mus_musculus_pwkphj | MGP_PWKPhJ_P0021806 | 99.8077 | 99.8077 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.5192 | 98.6538 | mus_spretus | MGP_SPRETEiJ_P0021595 | 99.5192 | 98.6538 |
MGP_WSBEiJ_G0016029 | mus_musculus_wsbeij | MGP_WSBEiJ_P0022114 | 99.9038 | 99.8077 | mus_musculus_casteij | MGP_CASTEiJ_P0022083 | 99.9038 | 99.8077 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |