RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	MGP_SPRETEiJ_G0029379	Gene ID		Accession	-
Symbol	Hnrnpa2b1	Alias	-	Full Name	heterogeneous nuclear ribonucleoprotein A2/B1
Status	Confidence	Length	9966 bases	Strand	Minus strand
Position	6 : 49226634 - 49236599	RNA binding domain	HnRNPA1 , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
MGP_SPRETEiJ_P0076672	RRM_1	PF00076	7.2e-32	1
MGP_SPRETEiJ_P0076672	RRM_1	PF00076	7.2e-32	2
MGP_SPRETEiJ_P0076673	HnRNPA1	PF11627	9.5e-16	1
MGP_SPRETEiJ_P0076673	RRM_1	PF00076	1.2e-31	2
MGP_SPRETEiJ_P0076673	RRM_1	PF00076	1.2e-31	3
MGP_SPRETEiJ_P0076674	RRM_1	PF00076	7.2e-32	1
MGP_SPRETEiJ_P0076674	RRM_1	PF00076	7.2e-32	2
MGP_SPRETEiJ_P0076675	HnRNPA1	PF11627	1e-15	1
MGP_SPRETEiJ_P0076675	RRM_1	PF00076	1.1e-31	2
MGP_SPRETEiJ_P0076675	RRM_1	PF00076	1.1e-31	3
MGP_SPRETEiJ_P0076677	HnRNPA1	PF11627	9.5e-16	1
MGP_SPRETEiJ_P0076677	RRM_1	PF00076	1.2e-31	2
MGP_SPRETEiJ_P0076677	RRM_1	PF00076	1.2e-31	3
MGP_SPRETEiJ_P0076678	RRM_1	PF00076	7.2e-32	1
MGP_SPRETEiJ_P0076678	RRM_1	PF00076	7.2e-32	2
MGP_SPRETEiJ_P0076679	HnRNPA1	PF11627	1e-15	1
MGP_SPRETEiJ_P0076679	RRM_1	PF00076	1.1e-31	2
MGP_SPRETEiJ_P0076679	RRM_1	PF00076	1.1e-31	3
MGP_SPRETEiJ_P0076681	HnRNPA1	PF11627	1.7e-13	1
MGP_SPRETEiJ_P0076681	RRM_1	PF00076	2.9e-15	2
MGP_SPRETEiJ_P0076682	RRM_1	PF00076	1.2e-31	1
MGP_SPRETEiJ_P0076682	RRM_1	PF00076	1.2e-31	2

Showing 1 to 22 of 22 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
No data available in table

Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

Show entries

Search:

Name	Transcript ID	bp	Protein	Translation ID
Hnrnpa2b1-201	MGP_SPRETEiJ_T0076672	1642	301aa	MGP_SPRETEiJ_P0076672"/note="transcript_id=MGP_SPRETEiJ_T0076672
Hnrnpa2b1-202	MGP_SPRETEiJ_T0076673	1703	353aa	MGP_SPRETEiJ_P0076673"/note="transcript_id=MGP_SPRETEiJ_T0076673
Hnrnpa2b1-203	MGP_SPRETEiJ_T0076674	1542	301aa	MGP_SPRETEiJ_P0076674"/note="transcript_id=MGP_SPRETEiJ_T0076674
Hnrnpa2b1-204	MGP_SPRETEiJ_T0076675	1662	341aa	MGP_SPRETEiJ_P0076675"/note="transcript_id=MGP_SPRETEiJ_T0076675
Hnrnpa2b1-205	MGP_SPRETEiJ_T0076676	1554	No protein	-
Hnrnpa2b1-206	MGP_SPRETEiJ_T0076677	1728	353aa	MGP_SPRETEiJ_P0076677"/note="transcript_id=MGP_SPRETEiJ_T0076677
Hnrnpa2b1-207	MGP_SPRETEiJ_T0076678	1518	301aa	MGP_SPRETEiJ_P0076678"/note="transcript_id=MGP_SPRETEiJ_T0076678
Hnrnpa2b1-208	MGP_SPRETEiJ_T0076679	1638	341aa	MGP_SPRETEiJ_P0076679"/note="transcript_id=MGP_SPRETEiJ_T0076679
Hnrnpa2b1-209	MGP_SPRETEiJ_T0076680	767	No protein	-
Hnrnpa2b1-210	MGP_SPRETEiJ_T0076681	466	154aa	MGP_SPRETEiJ_P0076681"/note="transcript_id=MGP_SPRETEiJ_T0076681

Showing 1 to 10 of 14 entries

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Gene Model

Click here to download MGP_SPRETEiJ_G0029379's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
No data available in table

Protein-Protein Interaction (PPI)

Click here to download MGP_SPRETEiJ_G0029379's PPI file

Paralogs

Show entries

Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0025027	54.6512	36.6279	mus_spretus	MGP_SPRETEiJ_P0076677	26.6289	17.847
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0094691	58.4416	40.2597	mus_spretus	MGP_SPRETEiJ_P0076677	25.4958	17.5637
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0096368	24.0223	14.8976	mus_spretus	MGP_SPRETEiJ_P0076677	36.5439	22.6629
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0071931	37.381	25	mus_spretus	MGP_SPRETEiJ_P0076677	44.4759	29.745
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0019831	17.3975	9.47666	mus_spretus	MGP_SPRETEiJ_P0076677	34.8442	18.9802
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0048344	20.1705	9.375	mus_spretus	MGP_SPRETEiJ_P0076677	20.1133	9.34844
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0027906	48.1928	30.4217	mus_spretus	MGP_SPRETEiJ_P0076677	45.3258	28.6119
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0072827	44.7514	32.0442	mus_spretus	MGP_SPRETEiJ_P0076677	45.8924	32.8612
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0095276	37.3402	25.3197	mus_spretus	MGP_SPRETEiJ_P0076677	41.3598	28.0453
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0067352	28.5714	13.9373	mus_spretus	MGP_SPRETEiJ_P0076677	23.2295	11.3314

Showing 1 to 10 of 28 entries

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Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	100	100	mus_caroli	MGP_CAROLIEiJ_P0073811	100	100
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	99.7167	99.7167	mus_pahari	MGP_PahariEiJ_P0049903	100	100
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	100	100	mus_spicilegus	ENSMSIP00000011743	100	100
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	100	99.7167	rattus_norvegicus	ENSRNOP00000015152	100	99.7167
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	100	100	mus_musculus	ENSMUSP00000110103	100	100
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	96.3173	95.4674	ornithorhynchus_anatinus	ENSOANP00000014577	98.8372	97.9651
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	95.7507	95.4674	choloepus_hoffmanni	ENSCHOP00000012250	100	99.7041
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	99.7167	99.4334	dasypus_novemcinctus	ENSDNOP00000010035	99.435	99.1525
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	86.9688	86.119	erinaceus_europaeus	ENSEEUP00000013581	87.7143	86.8571
MGP_SPRETEiJ_G0029379	mus_spretus	MGP_SPRETEiJ_P0076677	87.8187	87.2521	echinops_telfairi	ENSETEP00000015099	88.0682	87.5

Showing 1 to 10 of 146 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression