Description

Ensembl ID MGP_SPRETEiJ_G0026169 Gene ID Accession -
Symbol Alias - Full Name ribosomal protein S27
Status Confidence Length 1150 bases Strand Minus strand
Position 3 : 88570154 - 88571303 RNA binding domain Ribosomal_S27e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_SPRETEiJ_P0061144 Ribosomal_S27e PF01667 3.3e-30 1
MGP_SPRETEiJ_P0061145 Ribosomal_S27e PF01667 3.5e-30 1
MGP_SPRETEiJ_P0061149 Ribosomal_S27e PF01667 1.8e-27 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rps27-201 MGP_SPRETEiJ_T0061144 452 82aa MGP_SPRETEiJ_P0061144"/note="transcript_id=MGP_SPRETEiJ_T0061144
Rps27-202 MGP_SPRETEiJ_T0061145 386 84aa MGP_SPRETEiJ_P0061145"/note="transcript_id=MGP_SPRETEiJ_T0061145
Rps27-203 MGP_SPRETEiJ_T0061146 528 No protein -
Rps27-204 MGP_SPRETEiJ_T0061147 640 No protein -
Rps27-205 MGP_SPRETEiJ_T0061148 546 No protein -
Rps27-206 MGP_SPRETEiJ_T0061149 329 83aa MGP_SPRETEiJ_P0061149"/note="transcript_id=MGP_SPRETEiJ_T0061149
Rps27-207 MGP_SPRETEiJ_T0061150 672 No protein -
Rps27-208 MGP_SPRETEiJ_T0061151 279 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P009207370.476268.5714mus_spretusMGP_SPRETEiJ_P006114588.095285.7143

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100mus_musculusENSMUSP00000132102100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100ornithorhynchus_anatinusENSOANP00000038462100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100cercocebus_atysENSCATP00000005989100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114510098.8095cercocebus_atysENSCATP0000000031810098.8095
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100mandrillus_leucophaeusENSMLEP00000004866100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100gorilla_gorillaENSGGOP00000021532100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100pan_paniscusENSPPAP00000001528100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100ailuropoda_melanoleucaENSAMEP00000012527100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114588.095283.3333felis_catusENSFCAP0000001459388.095283.3333
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114588.095283.3333panthera_pardusENSPPRP0000002688588.095283.3333
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100balaenoptera_musculusENSBMSP00010000507100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114598.809596.4286oryctolagus_cuniculusENSOCUP0000002950098.809596.4286
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114598.809596.4286mesocricetus_auratusENSMAUP0000000288295.402393.1034
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100microtus_ochrogasterENSMOCP00000010131100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100vombatus_ursinusENSVURP00010021948100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100saimiri_boliviensis_boliviensisENSSBOP00000010812100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114598.809598.8095octodon_degusENSODEP0000002633698.809598.8095
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100cavia_porcellusENSCPOP00000014552100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100propithecus_coquereliENSPCOP00000004219100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100nannospalax_galiliENSNGAP00000004440100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100rhinopithecus_roxellanaENSRROP00000018614100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114598.809597.619cebus_imitatorENSCCAP0000000217198.809597.619
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100rhinopithecus_bietiENSRBIP00000005828100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114558.333353.5714eptatretus_burgeriENSEBUP0000000781468.055662.5
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100xenopus_tropicalisENSXETP00000108945100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100chrysemys_picta_belliiENSCPBP00000035415100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114598.809596.4286ciona_savignyiENSCSAVP0000000899498.809596.4286
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P0061145100100gopherus_evgoodeiENSGEVP00005021584100100
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114555.952455.9524struthio_camelus_australisENSSCUP0000001093188.679288.6792
MGP_SPRETEiJ_G0026169mus_spretusMGP_SPRETEiJ_P006114583.333379.7619cyprinus_carpio_carpioENSCCRP0000016009988.607684.8101

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression