RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_SPRETEiJ_G0026169 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
ribosomal protein S27 |
Status |
Confidence |
Length |
1150 bases |
Strand |
Minus strand |
Position |
3 : 88570154 - 88571303 |
RNA binding domain |
Ribosomal_S27e |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_SPRETEiJ_P0061144 |
Ribosomal_S27e |
PF01667 |
3.3e-30 |
1 |
MGP_SPRETEiJ_P0061145 |
Ribosomal_S27e |
PF01667 |
3.5e-30 |
1 |
MGP_SPRETEiJ_P0061149 |
Ribosomal_S27e |
PF01667 |
1.8e-27 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rps27-201 |
MGP_SPRETEiJ_T0061144 |
452 |
82aa |
MGP_SPRETEiJ_P0061144"/note="transcript_id=MGP_SPRETEiJ_T0061144 |
Rps27-202 |
MGP_SPRETEiJ_T0061145 |
386 |
84aa |
MGP_SPRETEiJ_P0061145"/note="transcript_id=MGP_SPRETEiJ_T0061145 |
Rps27-203 |
MGP_SPRETEiJ_T0061146 |
528 |
No protein |
- |
Rps27-204 |
MGP_SPRETEiJ_T0061147 |
640 |
No protein |
- |
Rps27-205 |
MGP_SPRETEiJ_T0061148 |
546 |
No protein |
- |
Rps27-206 |
MGP_SPRETEiJ_T0061149 |
329 |
83aa |
MGP_SPRETEiJ_P0061149"/note="transcript_id=MGP_SPRETEiJ_T0061149 |
Rps27-207 |
MGP_SPRETEiJ_T0061150 |
672 |
No protein |
- |
Rps27-208 |
MGP_SPRETEiJ_T0061151 |
279 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0092073 | 70.4762 | 68.5714 | mus_spretus | MGP_SPRETEiJ_P0061145 | 88.0952 | 85.7143 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | mus_musculus | ENSMUSP00000132102 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | ornithorhynchus_anatinus | ENSOANP00000038462 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | cercocebus_atys | ENSCATP00000005989 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 98.8095 | cercocebus_atys | ENSCATP00000000318 | 100 | 98.8095 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | mandrillus_leucophaeus | ENSMLEP00000004866 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | gorilla_gorilla | ENSGGOP00000021532 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | pan_paniscus | ENSPPAP00000001528 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | ailuropoda_melanoleuca | ENSAMEP00000012527 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 88.0952 | 83.3333 | felis_catus | ENSFCAP00000014593 | 88.0952 | 83.3333 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 88.0952 | 83.3333 | panthera_pardus | ENSPPRP00000026885 | 88.0952 | 83.3333 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | balaenoptera_musculus | ENSBMSP00010000507 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 98.8095 | 96.4286 | oryctolagus_cuniculus | ENSOCUP00000029500 | 98.8095 | 96.4286 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 98.8095 | 96.4286 | mesocricetus_auratus | ENSMAUP00000002882 | 95.4023 | 93.1034 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | microtus_ochrogaster | ENSMOCP00000010131 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | vombatus_ursinus | ENSVURP00010021948 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | saimiri_boliviensis_boliviensis | ENSSBOP00000010812 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 98.8095 | 98.8095 | octodon_degus | ENSODEP00000026336 | 98.8095 | 98.8095 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | cavia_porcellus | ENSCPOP00000014552 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | propithecus_coquereli | ENSPCOP00000004219 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | nannospalax_galili | ENSNGAP00000004440 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | rhinopithecus_roxellana | ENSRROP00000018614 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 98.8095 | 97.619 | cebus_imitator | ENSCCAP00000002171 | 98.8095 | 97.619 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | rhinopithecus_bieti | ENSRBIP00000005828 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 58.3333 | 53.5714 | eptatretus_burgeri | ENSEBUP00000007814 | 68.0556 | 62.5 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | xenopus_tropicalis | ENSXETP00000108945 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | chrysemys_picta_bellii | ENSCPBP00000035415 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 98.8095 | 96.4286 | ciona_savignyi | ENSCSAVP00000008994 | 98.8095 | 96.4286 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 100 | 100 | gopherus_evgoodei | ENSGEVP00005021584 | 100 | 100 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 55.9524 | 55.9524 | struthio_camelus_australis | ENSSCUP00000010931 | 88.6792 | 88.6792 |
MGP_SPRETEiJ_G0026169 | mus_spretus | MGP_SPRETEiJ_P0061145 | 83.3333 | 79.7619 | cyprinus_carpio_carpio | ENSCCRP00000160099 | 88.6076 | 84.8101 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |