Description

Ensembl ID MGP_PWKPhJ_G0033455 Gene ID Accession -
Symbol Sidt2 Alias - Full Name SID1 transmembrane family, member 2
Status Confidence Length 19443 bases Strand Minus strand
Position 9 : 43064649 - 43084091 RNA binding domain SID-1_RNA_chan
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0091759 SID-1_RNA_chan PF13965 1.1e-289 1
MGP_PWKPhJ_P0091760 SID-1_RNA_chan PF13965 2.3e-289 1
MGP_PWKPhJ_P0091767 SID-1_RNA_chan PF13965 1.2e-68 1
MGP_PWKPhJ_P0091770 SID-1_RNA_chan PF13965 3.4e-43 1
MGP_PWKPhJ_P0091768 SID-1_RNA_chan PF13965 6.4e-39 1
MGP_PWKPhJ_P0091769 SID-1_RNA_chan PF13965 1e-26 1
MGP_PWKPhJ_P0091761 SID-1_RNA_chan PF13965 4.7e-20 1
MGP_PWKPhJ_P0091766 SID-1_RNA_chan PF13965 1.5e-15 1
MGP_PWKPhJ_P0091764 SID-1_RNA_chan PF13965 9.4e-15 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sidt2-001 MGP_PWKPhJ_T0091759 4227 832aa MGP_PWKPhJ_P0091759"/note="transcript_id=MGP_PWKPhJ_T0091759
- MGP_PWKPhJ_T0091760 4012 853aa MGP_PWKPhJ_P0091760"/note="transcript_id=MGP_PWKPhJ_T0091760
- MGP_PWKPhJ_T0091761 221 73aa MGP_PWKPhJ_P0091761"/note="transcript_id=MGP_PWKPhJ_T0091761
- MGP_PWKPhJ_T0091762 628 No protein -
- MGP_PWKPhJ_T0091763 816 No protein -
- MGP_PWKPhJ_T0091764 676 79aa MGP_PWKPhJ_P0091764"/note="transcript_id=MGP_PWKPhJ_T0091764
- MGP_PWKPhJ_T0091765 818 No protein -
- MGP_PWKPhJ_T0091766 529 176aa MGP_PWKPhJ_P0091766"/note="transcript_id=MGP_PWKPhJ_T0091766
- MGP_PWKPhJ_T0091767 1744 493aa MGP_PWKPhJ_P0091767"/note="transcript_id=MGP_PWKPhJ_T0091767
- MGP_PWKPhJ_T0091768 667 222aa MGP_PWKPhJ_P0091768"/note="transcript_id=MGP_PWKPhJ_T0091768
- MGP_PWKPhJ_T0091769 661 220aa MGP_PWKPhJ_P0091769"/note="transcript_id=MGP_PWKPhJ_T0091769
- MGP_PWKPhJ_T0091770 621 139aa MGP_PWKPhJ_P0091770"/note="transcript_id=MGP_PWKPhJ_T0091770
- MGP_PWKPhJ_T0091771 316 105aa MGP_PWKPhJ_P0091771"/note="transcript_id=MGP_PWKPhJ_T0091771
- MGP_PWKPhJ_T0091772 1007 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P004389373.557758.6538mus_musculus_pwkphjMGP_PWKPhJ_P009176071.746857.2098

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176099.882899.8828mus_caroliMGP_CAROLIEiJ_P008766799.882899.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P0091760100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0092162100100
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_ajMGP_AJ_P009223410099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_c3hhejMGP_C3HHeJ_P009173610099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_cbajMGP_CBAJ_P009166810099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_balbcjMGP_BALBcJ_P009215810099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_fvbnjMGP_FVBNJ_P009171110099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_c57bl6njMGP_C57BL6NJ_P009269110099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176099.882899.7655mus_musculus_nodshiltjMGP_NODShiLtJ_P009172099.882899.7655
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176099.413899.2966mus_pahariMGP_PahariEiJ_P002332299.413899.2966
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_nzohlltjMGP_NZOHlLtJ_P009300410099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_dba2jMGP_DBA2J_P009187610099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P0091760100100mus_musculus_casteijMGP_CASTEiJ_P0092331100100
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_akrjMGP_AKRJ_P009218510099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P0091760100100mus_spicilegusENSMSIP00000012613100100
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176099.531199.4138rattus_norvegicusENSRNOP0000009223686.368386.2665
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P0091760100100mus_musculus_lpjMGP_LPJ_P0091889100100
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P0091760100100mus_spretusMGP_SPRETEiJ_P0091259100100
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculus_wsbeijMGP_WSBEiJ_P009076010099.8828
MGP_PWKPhJ_G0033455mus_musculus_pwkphjMGP_PWKPhJ_P009176010099.8828mus_musculusENSMUSP0000011022010099.8828

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression