RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0033008 | Gene ID |
|
Accession |
- |
Symbol |
Tarbp1 |
Alias |
- |
Full Name |
TAR RNA binding protein 1 |
Status |
Confidence |
Length |
52789 bases |
Strand |
Minus strand |
Position |
8 : 123745174 - 123797962 |
RNA binding domain |
SpoU_methylase |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0090604 |
SpoU_methylase |
PF00588 |
7e-31 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tarbp1-001 |
MGP_PWKPhJ_T0090604 |
5060 |
1579aa |
MGP_PWKPhJ_P0090604"/note="transcript_id=MGP_PWKPhJ_T0090604 |
- |
MGP_PWKPhJ_T0090605 |
1465 |
405aa |
MGP_PWKPhJ_P0090605"/note="transcript_id=MGP_PWKPhJ_T0090605 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0029972 | 36.1244 | 20.0957 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 9.56301 | 5.31982 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0030557 | 40.625 | 22.8125 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 8.23306 | 4.62318 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 97.9734 | 96.4535 | mus_caroli | MGP_CAROLIEiJ_P0086575 | 97.9734 | 96.4535 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0091020 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.3667 | 98.67 | mus_musculus_aj | MGP_AJ_P0091101 | 99.3667 | 98.67 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.3667 | 98.67 | mus_musculus_c3hhej | MGP_C3HHeJ_P0090601 | 99.3667 | 98.67 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_cbaj | MGP_CBAJ_P0090532 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 95.8201 | 95.1868 | mus_musculus_balbcj | MGP_BALBcJ_P0091030 | 99.3434 | 98.6868 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_fvbnj | MGP_FVBNJ_P0090578 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0091547 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0090606 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 97.3401 | 95.0602 | mus_pahari | MGP_PahariEiJ_P0054819 | 97.2169 | 94.9399 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0091866 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_dba2j | MGP_DBA2J_P0090745 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.05 | 98.4167 | mus_musculus_casteij | MGP_CASTEiJ_P0091169 | 99.05 | 98.4167 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 35.9088 | 28.2457 | mus_musculus_akrj | MGP_AKRJ_P0091041 | 37.156 | 29.2267 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 98.9234 | 98.1001 | mus_spicilegus | ENSMSIP00000026718 | 98.9234 | 98.1001 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 92.5269 | 89.107 | rattus_norvegicus | ENSRNOP00000070582 | 92.5855 | 89.1635 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus_lpj | MGP_LPJ_P0090769 | 99.43 | 98.7967 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 98.86 | 97.8467 | mus_spretus | MGP_SPRETEiJ_P0090107 | 98.86 | 97.8467 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.3667 | 98.6067 | mus_musculus_wsbeij | MGP_WSBEiJ_P0089639 | 99.3667 | 98.6067 |
MGP_PWKPhJ_G0033008 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090604 | 99.43 | 98.7967 | mus_musculus | ENSMUSP00000129815 | 99.43 | 98.7967 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |