Description

Ensembl ID MGP_PWKPhJ_G0033008 Gene ID Accession -
Symbol Tarbp1 Alias - Full Name TAR RNA binding protein 1
Status Confidence Length 52789 bases Strand Minus strand
Position 8 : 123745174 - 123797962 RNA binding domain SpoU_methylase
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0090604 SpoU_methylase PF00588 7e-31 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tarbp1-001 MGP_PWKPhJ_T0090604 5060 1579aa MGP_PWKPhJ_P0090604"/note="transcript_id=MGP_PWKPhJ_T0090604
- MGP_PWKPhJ_T0090605 1465 405aa MGP_PWKPhJ_P0090605"/note="transcript_id=MGP_PWKPhJ_T0090605

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P002997236.124420.0957mus_musculus_pwkphjMGP_PWKPhJ_P00906049.563015.31982
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P003055740.62522.8125mus_musculus_pwkphjMGP_PWKPhJ_P00906048.233064.62318

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060497.973496.4535mus_caroliMGP_CAROLIEiJ_P008657597.973496.4535
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_129s1svimjMGP_129S1SvImJ_P009102099.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.366798.67mus_musculus_ajMGP_AJ_P009110199.366798.67
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.366798.67mus_musculus_c3hhejMGP_C3HHeJ_P009060199.366798.67
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_cbajMGP_CBAJ_P009053299.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060495.820195.1868mus_musculus_balbcjMGP_BALBcJ_P009103099.343498.6868
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_fvbnjMGP_FVBNJ_P009057899.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_c57bl6njMGP_C57BL6NJ_P009154799.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_nodshiltjMGP_NODShiLtJ_P009060699.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060497.340195.0602mus_pahariMGP_PahariEiJ_P005481997.216994.9399
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_nzohlltjMGP_NZOHlLtJ_P009186699.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_dba2jMGP_DBA2J_P009074599.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.0598.4167mus_musculus_casteijMGP_CASTEiJ_P009116999.0598.4167
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060435.908828.2457mus_musculus_akrjMGP_AKRJ_P009104137.15629.2267
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060498.923498.1001mus_spicilegusENSMSIP0000002671898.923498.1001
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060492.526989.107rattus_norvegicusENSRNOP0000007058292.585589.1635
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculus_lpjMGP_LPJ_P009076999.4398.7967
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060498.8697.8467mus_spretusMGP_SPRETEiJ_P009010798.8697.8467
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.366798.6067mus_musculus_wsbeijMGP_WSBEiJ_P008963999.366798.6067
MGP_PWKPhJ_G0033008mus_musculus_pwkphjMGP_PWKPhJ_P009060499.4398.7967mus_musculusENSMUSP0000012981599.4398.7967

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression