Description

Ensembl ID MGP_PWKPhJ_G0030975 Gene ID Accession -
Symbol Snrnp70 Alias - Full Name small nuclear ribonucleoprotein 70 (U1)
Status Confidence Length 22225 bases Strand Minus strand
Position 7 : 37798315 - 37820539 RNA binding domain RRM_1 , U1snRNP70_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0083329 RRM_1 PF00076 2.2e-17 1
MGP_PWKPhJ_P0083328 RRM_1 PF00076 2.6e-17 1
MGP_PWKPhJ_P0083328 U1snRNP70_N PF12220 1.2e-25 2
MGP_PWKPhJ_P0083333 RRM_1 PF00076 3.9e-13 1
MGP_PWKPhJ_P0083333 U1snRNP70_N PF12220 4e-06 2
MGP_PWKPhJ_P0083338 RRM_1 PF00076 1e-12 1
MGP_PWKPhJ_P0083338 U1snRNP70_N PF12220 9.5e-27 2
MGP_PWKPhJ_P0083330 RRM_1 PF00076 2.8e-08 1
MGP_PWKPhJ_P0083340 U1snRNP70_N PF12220 3.5e-27 1
MGP_PWKPhJ_P0083337 U1snRNP70_N PF12220 6.4e-23 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Snrnp70-001 MGP_PWKPhJ_T0083328 1738 449aa MGP_PWKPhJ_P0083328"/note="transcript_id=MGP_PWKPhJ_T0083328
- MGP_PWKPhJ_T0083329 1262 357aa MGP_PWKPhJ_P0083329"/note="transcript_id=MGP_PWKPhJ_T0083329
- MGP_PWKPhJ_T0083330 451 86aa MGP_PWKPhJ_P0083330"/note="transcript_id=MGP_PWKPhJ_T0083330
- MGP_PWKPhJ_T0083331 4011 No protein -
- MGP_PWKPhJ_T0083332 3038 No protein -
- MGP_PWKPhJ_T0083333 707 115aa MGP_PWKPhJ_P0083333"/note="transcript_id=MGP_PWKPhJ_T0083333
- MGP_PWKPhJ_T0083334 2922 No protein -
- MGP_PWKPhJ_T0083335 733 No protein -
- MGP_PWKPhJ_T0083336 620 No protein -
- MGP_PWKPhJ_T0083337 616 111aa MGP_PWKPhJ_P0083337"/note="transcript_id=MGP_PWKPhJ_T0083337
- MGP_PWKPhJ_T0083338 618 168aa MGP_PWKPhJ_P0083338"/note="transcript_id=MGP_PWKPhJ_T0083338
- MGP_PWKPhJ_T0083339 605 No protein -
- MGP_PWKPhJ_T0083340 620 109aa MGP_PWKPhJ_P0083340"/note="transcript_id=MGP_PWKPhJ_T0083340
- MGP_PWKPhJ_T0083341 212 No protein -
- MGP_PWKPhJ_T0083342 1898 No protein -
- MGP_PWKPhJ_T0083343 579 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P009073036.184221.0526mus_musculus_pwkphjMGP_PWKPhJ_P008332812.24947.12695
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P007410158.196740.5738mus_musculus_pwkphjMGP_PWKPhJ_P008332831.625822.049

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.554699.1091mus_caroliMGP_CAROLIEiJ_P007949498.241897.8022
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_129s1svimjMGP_129S1SvImJ_P008378210099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_ajMGP_AJ_P008385110099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_c3hhejMGP_C3HHeJ_P008339710099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_cbajMGP_CBAJ_P008333510099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_balbcjMGP_BALBcJ_P008382310099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_fvbnjMGP_FVBNJ_P008337710099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_c57bl6njMGP_C57BL6NJ_P008431910099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_nodshiltjMGP_NODShiLtJ_P008342910099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.331899.1091mus_pahariMGP_PahariEiJ_P001636399.776399.5526
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332897.995597.7728mus_musculus_nzohlltjMGP_NZOHlLtJ_P008459410099.7727
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_dba2jMGP_DBA2J_P008352210099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_casteijMGP_CASTEiJ_P008391010099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_akrjMGP_AKRJ_P008379610099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_spicilegusENSMSIP0000002296610099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_lpjMGP_LPJ_P008353810099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_spretusMGP_SPRETEiJ_P008283010099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculus_wsbeijMGP_WSBEiJ_P008244910099.7768
MGP_PWKPhJ_G0030975mus_musculus_pwkphjMGP_PWKPhJ_P008332899.777399.5546mus_musculusENSMUSP0000007416010099.7768

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression