RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0030975 | Gene ID |
|
Accession |
- |
Symbol |
Snrnp70 |
Alias |
- |
Full Name |
small nuclear ribonucleoprotein 70 (U1) |
Status |
Confidence |
Length |
22225 bases |
Strand |
Minus strand |
Position |
7 : 37798315 - 37820539 |
RNA binding domain |
RRM_1 , U1snRNP70_N |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0083329 |
RRM_1 |
PF00076 |
2.2e-17 |
1 |
MGP_PWKPhJ_P0083328 |
RRM_1 |
PF00076 |
2.6e-17 |
1 |
MGP_PWKPhJ_P0083328 |
U1snRNP70_N |
PF12220 |
1.2e-25 |
2 |
MGP_PWKPhJ_P0083333 |
RRM_1 |
PF00076 |
3.9e-13 |
1 |
MGP_PWKPhJ_P0083333 |
U1snRNP70_N |
PF12220 |
4e-06 |
2 |
MGP_PWKPhJ_P0083338 |
RRM_1 |
PF00076 |
1e-12 |
1 |
MGP_PWKPhJ_P0083338 |
U1snRNP70_N |
PF12220 |
9.5e-27 |
2 |
MGP_PWKPhJ_P0083330 |
RRM_1 |
PF00076 |
2.8e-08 |
1 |
MGP_PWKPhJ_P0083340 |
U1snRNP70_N |
PF12220 |
3.5e-27 |
1 |
MGP_PWKPhJ_P0083337 |
U1snRNP70_N |
PF12220 |
6.4e-23 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Snrnp70-001 |
MGP_PWKPhJ_T0083328 |
1738 |
449aa |
MGP_PWKPhJ_P0083328"/note="transcript_id=MGP_PWKPhJ_T0083328 |
- |
MGP_PWKPhJ_T0083329 |
1262 |
357aa |
MGP_PWKPhJ_P0083329"/note="transcript_id=MGP_PWKPhJ_T0083329 |
- |
MGP_PWKPhJ_T0083330 |
451 |
86aa |
MGP_PWKPhJ_P0083330"/note="transcript_id=MGP_PWKPhJ_T0083330 |
- |
MGP_PWKPhJ_T0083331 |
4011 |
No protein |
- |
- |
MGP_PWKPhJ_T0083332 |
3038 |
No protein |
- |
- |
MGP_PWKPhJ_T0083333 |
707 |
115aa |
MGP_PWKPhJ_P0083333"/note="transcript_id=MGP_PWKPhJ_T0083333 |
- |
MGP_PWKPhJ_T0083334 |
2922 |
No protein |
- |
- |
MGP_PWKPhJ_T0083335 |
733 |
No protein |
- |
- |
MGP_PWKPhJ_T0083336 |
620 |
No protein |
- |
- |
MGP_PWKPhJ_T0083337 |
616 |
111aa |
MGP_PWKPhJ_P0083337"/note="transcript_id=MGP_PWKPhJ_T0083337 |
- |
MGP_PWKPhJ_T0083338 |
618 |
168aa |
MGP_PWKPhJ_P0083338"/note="transcript_id=MGP_PWKPhJ_T0083338 |
- |
MGP_PWKPhJ_T0083339 |
605 |
No protein |
- |
- |
MGP_PWKPhJ_T0083340 |
620 |
109aa |
MGP_PWKPhJ_P0083340"/note="transcript_id=MGP_PWKPhJ_T0083340 |
- |
MGP_PWKPhJ_T0083341 |
212 |
No protein |
- |
- |
MGP_PWKPhJ_T0083342 |
1898 |
No protein |
- |
- |
MGP_PWKPhJ_T0083343 |
579 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090730 | 36.1842 | 21.0526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 12.2494 | 7.12695 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0074101 | 58.1967 | 40.5738 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 31.6258 | 22.049 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.5546 | 99.1091 | mus_caroli | MGP_CAROLIEiJ_P0079494 | 98.2418 | 97.8022 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0083782 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_aj | MGP_AJ_P0083851 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_c3hhej | MGP_C3HHeJ_P0083397 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_cbaj | MGP_CBAJ_P0083335 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_balbcj | MGP_BALBcJ_P0083823 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_fvbnj | MGP_FVBNJ_P0083377 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0084319 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0083429 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.3318 | 99.1091 | mus_pahari | MGP_PahariEiJ_P0016363 | 99.7763 | 99.5526 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 97.9955 | 97.7728 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0084594 | 100 | 99.7727 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_dba2j | MGP_DBA2J_P0083522 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_casteij | MGP_CASTEiJ_P0083910 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_akrj | MGP_AKRJ_P0083796 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_spicilegus | ENSMSIP00000022966 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_lpj | MGP_LPJ_P0083538 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_spretus | MGP_SPRETEiJ_P0082830 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus_wsbeij | MGP_WSBEiJ_P0082449 | 100 | 99.7768 |
MGP_PWKPhJ_G0030975 | mus_musculus_pwkphj | MGP_PWKPhJ_P0083328 | 99.7773 | 99.5546 | mus_musculus | ENSMUSP00000074160 | 100 | 99.7768 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |