Description

Ensembl ID MGP_PWKPhJ_G0027602 Gene ID Accession -
Symbol Sf3a3 Alias - Full Name splicing factor 3a, subunit 3
Status Confidence Length 20374 bases Strand Plus strand
Position 4 : 118198922 - 118219295 RNA binding domain SF3a60_Prp9_C , SF3a60_bindingd
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0067244 SF3a60_Prp9_C PF11931 1.2e-54 1
MGP_PWKPhJ_P0067244 SF3a60_bindingd PF12108 2e-15 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sf3a3-001 MGP_PWKPhJ_T0067244 1820 501aa MGP_PWKPhJ_P0067244"/note="transcript_id=MGP_PWKPhJ_T0067244
- MGP_PWKPhJ_T0067245 798 No protein -
- MGP_PWKPhJ_T0067246 879 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P002292128.12519.6429mus_musculus_pwkphjMGP_PWKPhJ_P006724425.149717.5649

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_caroliMGP_CAROLIEiJ_P0064298100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0067687100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_ajMGP_AJ_P0067745100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_c3hhejMGP_C3HHeJ_P0067333100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_cbajMGP_CBAJ_P0067279100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_balbcjMGP_BALBcJ_P0067665100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_fvbnjMGP_FVBNJ_P0067333100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0068155100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0067328100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P006724494.810494.6108mus_pahariMGP_PahariEiJ_P007939198.547798.3402
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0068335100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_dba2jMGP_DBA2J_P0067418100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_casteijMGP_CASTEiJ_P0067734100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_akrjMGP_AKRJ_P0067651100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P006724499.600899.2016mus_spicilegusENSMSIP0000001767699.899.4
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100rattus_norvegicusENSRNOP00000010373100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_lpjMGP_LPJ_P0067513100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_spretusMGP_SPRETEiJ_P0066794100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculus_wsbeijMGP_WSBEiJ_P0066526100100
MGP_PWKPhJ_G0027602mus_musculus_pwkphjMGP_PWKPhJ_P0067244100100mus_musculusENSMUSP00000030734100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression