RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0027602 | Gene ID |
|
Accession |
- |
Symbol |
Sf3a3 |
Alias |
- |
Full Name |
splicing factor 3a, subunit 3 |
Status |
Confidence |
Length |
20374 bases |
Strand |
Plus strand |
Position |
4 : 118198922 - 118219295 |
RNA binding domain |
SF3a60_Prp9_C , SF3a60_bindingd |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0067244 |
SF3a60_Prp9_C |
PF11931 |
1.2e-54 |
1 |
MGP_PWKPhJ_P0067244 |
SF3a60_bindingd |
PF12108 |
2e-15 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Sf3a3-001 |
MGP_PWKPhJ_T0067244 |
1820 |
501aa |
MGP_PWKPhJ_P0067244"/note="transcript_id=MGP_PWKPhJ_T0067244 |
- |
MGP_PWKPhJ_T0067245 |
798 |
No protein |
- |
- |
MGP_PWKPhJ_T0067246 |
879 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0022921 | 28.125 | 19.6429 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 25.1497 | 17.5649 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0064298 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0067687 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0067745 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0067333 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0067279 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0067665 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0067333 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0068155 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0067328 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 94.8104 | 94.6108 | mus_pahari | MGP_PahariEiJ_P0079391 | 98.5477 | 98.3402 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0068335 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0067418 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0067734 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0067651 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 99.6008 | 99.2016 | mus_spicilegus | ENSMSIP00000017676 | 99.8 | 99.4 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | rattus_norvegicus | ENSRNOP00000010373 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0067513 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0066794 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0066526 | 100 | 100 |
MGP_PWKPhJ_G0027602 | mus_musculus_pwkphj | MGP_PWKPhJ_P0067244 | 100 | 100 | mus_musculus | ENSMUSP00000030734 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |