Description

Ensembl ID MGP_PWKPhJ_G0024635 Gene ID Accession -
Symbol Strbp Alias - Full Name spermatid perinuclear RNA binding protein
Status Confidence Length 229371 bases Strand Minus strand
Position 2 : 34339913 - 34569283 RNA binding domain dsrm , DZF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0054009 dsrm PF00035 2e-24 1
MGP_PWKPhJ_P0054009 dsrm PF00035 2e-24 2
MGP_PWKPhJ_P0054009 DZF PF07528 1.1e-79 3
MGP_PWKPhJ_P0054015 dsrm PF00035 2.2e-24 1
MGP_PWKPhJ_P0054015 dsrm PF00035 2.2e-24 2
MGP_PWKPhJ_P0054015 DZF PF07528 1.2e-79 3
MGP_PWKPhJ_P0054018 dsrm PF00035 2.2e-24 1
MGP_PWKPhJ_P0054018 dsrm PF00035 2.2e-24 2
MGP_PWKPhJ_P0054018 DZF PF07528 1.2e-79 3
MGP_PWKPhJ_P0054020 DZF PF07528 2e-10 1
MGP_PWKPhJ_P0054021 DZF PF07528 1.6e-05 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Strbp-001 MGP_PWKPhJ_T0054009 2946 648aa MGP_PWKPhJ_P0054009"/note="transcript_id=MGP_PWKPhJ_T0054009
- MGP_PWKPhJ_T0054015 16288 672aa MGP_PWKPhJ_P0054015"/note="transcript_id=MGP_PWKPhJ_T0054015
- MGP_PWKPhJ_T0054016 625 No protein -
- MGP_PWKPhJ_T0054017 355 3aa MGP_PWKPhJ_P0054017"/note="transcript_id=MGP_PWKPhJ_T0054017
- MGP_PWKPhJ_T0054018 3217 672aa MGP_PWKPhJ_P0054018"/note="transcript_id=MGP_PWKPhJ_T0054018
- MGP_PWKPhJ_T0054019 1355 No protein -
- MGP_PWKPhJ_T0054020 968 167aa MGP_PWKPhJ_P0054020"/note="transcript_id=MGP_PWKPhJ_T0054020
- MGP_PWKPhJ_T0054021 746 128aa MGP_PWKPhJ_P0054021"/note="transcript_id=MGP_PWKPhJ_T0054021
- MGP_PWKPhJ_T0054022 398 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P00901114.809622.80561mus_musculus_pwkphjMGP_PWKPhJ_P00540153.571432.08333
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P006140715.28018.31919mus_musculus_pwkphjMGP_PWKPhJ_P005401526.785714.5833
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P002544126.773519.4508mus_musculus_pwkphjMGP_PWKPhJ_P005401534.821425.2976
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P009021812.12128.02139mus_musculus_pwkphjMGP_PWKPhJ_P005401510.1196.69643
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P009101955.011144.4321mus_musculus_pwkphjMGP_PWKPhJ_P005401573.511959.375
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005492723.642215.3355mus_musculus_pwkphjMGP_PWKPhJ_P005401511.01197.14286
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P003996324.022317.5978mus_musculus_pwkphjMGP_PWKPhJ_P005401538.392928.125
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P003554223.892615.9732mus_musculus_pwkphjMGP_PWKPhJ_P005401526.488117.7083
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P002491524.331916.737mus_musculus_pwkphjMGP_PWKPhJ_P005401525.74417.7083
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P006006015.34738.07754mus_musculus_pwkphjMGP_PWKPhJ_P005401514.13697.44048
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005887323.636414.1414mus_musculus_pwkphjMGP_PWKPhJ_P005401517.410710.4167
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P006155342.307720.5128mus_musculus_pwkphjMGP_PWKPhJ_P005401524.553611.9048
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P001801628.070215.7895mus_musculus_pwkphjMGP_PWKPhJ_P005401523.809513.3929
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P004217226.575316.4384mus_musculus_pwkphjMGP_PWKPhJ_P005401514.43458.92857

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_caroliMGP_CAROLIEiJ_P0051529100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0054539100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401524.851224.8512mus_musculus_ajMGP_AJ_P0054559100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_c3hhejMGP_C3HHeJ_P0054228100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_cbajMGP_CBAJ_P0054180100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401524.851224.8512mus_musculus_balbcjMGP_BALBcJ_P0054503100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_fvbnjMGP_FVBNJ_P0054247100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0054983100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0054238100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401599.25698.9583mus_pahariMGP_PahariEiJ_P006253799.25698.9583
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0055124100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_dba2jMGP_DBA2J_P0054287100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_casteijMGP_CASTEiJ_P0054408100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401524.851224.8512mus_musculus_akrjMGP_AKRJ_P0054521100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401599.851299.8512mus_spicilegusENSMSIP0000000087899.851299.8512
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401599.851299.5536rattus_norvegicusENSRNOP0000006254399.851299.5536
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401524.851224.8512mus_musculus_lpjMGP_LPJ_P0054394100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P005401524.851224.8512mus_spretusMGP_SPRETEiJ_P0053583100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculus_wsbeijMGP_WSBEiJ_P0053502100100
MGP_PWKPhJ_G0024635mus_musculus_pwkphjMGP_PWKPhJ_P0054015100100mus_musculusENSMUSP00000028279100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression