RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0024635 | Gene ID |
|
Accession |
- |
Symbol |
Strbp |
Alias |
- |
Full Name |
spermatid perinuclear RNA binding protein |
Status |
Confidence |
Length |
229371 bases |
Strand |
Minus strand |
Position |
2 : 34339913 - 34569283 |
RNA binding domain |
dsrm , DZF |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0054009 |
dsrm |
PF00035 |
2e-24 |
1 |
MGP_PWKPhJ_P0054009 |
dsrm |
PF00035 |
2e-24 |
2 |
MGP_PWKPhJ_P0054009 |
DZF |
PF07528 |
1.1e-79 |
3 |
MGP_PWKPhJ_P0054015 |
dsrm |
PF00035 |
2.2e-24 |
1 |
MGP_PWKPhJ_P0054015 |
dsrm |
PF00035 |
2.2e-24 |
2 |
MGP_PWKPhJ_P0054015 |
DZF |
PF07528 |
1.2e-79 |
3 |
MGP_PWKPhJ_P0054018 |
dsrm |
PF00035 |
2.2e-24 |
1 |
MGP_PWKPhJ_P0054018 |
dsrm |
PF00035 |
2.2e-24 |
2 |
MGP_PWKPhJ_P0054018 |
DZF |
PF07528 |
1.2e-79 |
3 |
MGP_PWKPhJ_P0054020 |
DZF |
PF07528 |
2e-10 |
1 |
MGP_PWKPhJ_P0054021 |
DZF |
PF07528 |
1.6e-05 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Strbp-001 |
MGP_PWKPhJ_T0054009 |
2946 |
648aa |
MGP_PWKPhJ_P0054009"/note="transcript_id=MGP_PWKPhJ_T0054009 |
- |
MGP_PWKPhJ_T0054015 |
16288 |
672aa |
MGP_PWKPhJ_P0054015"/note="transcript_id=MGP_PWKPhJ_T0054015 |
- |
MGP_PWKPhJ_T0054016 |
625 |
No protein |
- |
- |
MGP_PWKPhJ_T0054017 |
355 |
3aa |
MGP_PWKPhJ_P0054017"/note="transcript_id=MGP_PWKPhJ_T0054017 |
- |
MGP_PWKPhJ_T0054018 |
3217 |
672aa |
MGP_PWKPhJ_P0054018"/note="transcript_id=MGP_PWKPhJ_T0054018 |
- |
MGP_PWKPhJ_T0054019 |
1355 |
No protein |
- |
- |
MGP_PWKPhJ_T0054020 |
968 |
167aa |
MGP_PWKPhJ_P0054020"/note="transcript_id=MGP_PWKPhJ_T0054020 |
- |
MGP_PWKPhJ_T0054021 |
746 |
128aa |
MGP_PWKPhJ_P0054021"/note="transcript_id=MGP_PWKPhJ_T0054021 |
- |
MGP_PWKPhJ_T0054022 |
398 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090111 | 4.80962 | 2.80561 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 3.57143 | 2.08333 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0061407 | 15.2801 | 8.31919 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 26.7857 | 14.5833 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0025441 | 26.7735 | 19.4508 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 34.8214 | 25.2976 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090218 | 12.1212 | 8.02139 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 10.119 | 6.69643 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0091019 | 55.0111 | 44.4321 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 73.5119 | 59.375 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054927 | 23.6422 | 15.3355 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 11.0119 | 7.14286 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 24.0223 | 17.5978 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 38.3929 | 28.125 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0035542 | 23.8926 | 15.9732 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 26.4881 | 17.7083 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024915 | 24.3319 | 16.737 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 25.744 | 17.7083 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0060060 | 15.3473 | 8.07754 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 14.1369 | 7.44048 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0058873 | 23.6364 | 14.1414 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 17.4107 | 10.4167 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0061553 | 42.3077 | 20.5128 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 24.5536 | 11.9048 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0018016 | 28.0702 | 15.7895 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 23.8095 | 13.3929 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0042172 | 26.5753 | 16.4384 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 14.4345 | 8.92857 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0051529 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0054539 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 24.8512 | 24.8512 | mus_musculus_aj | MGP_AJ_P0054559 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0054228 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0054180 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 24.8512 | 24.8512 | mus_musculus_balbcj | MGP_BALBcJ_P0054503 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0054247 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0054983 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0054238 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 99.256 | 98.9583 | mus_pahari | MGP_PahariEiJ_P0062537 | 99.256 | 98.9583 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0055124 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0054287 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0054408 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 24.8512 | 24.8512 | mus_musculus_akrj | MGP_AKRJ_P0054521 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 99.8512 | 99.8512 | mus_spicilegus | ENSMSIP00000000878 | 99.8512 | 99.8512 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 99.8512 | 99.5536 | rattus_norvegicus | ENSRNOP00000062543 | 99.8512 | 99.5536 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 24.8512 | 24.8512 | mus_musculus_lpj | MGP_LPJ_P0054394 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 24.8512 | 24.8512 | mus_spretus | MGP_SPRETEiJ_P0053583 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0053502 | 100 | 100 |
MGP_PWKPhJ_G0024635 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 100 | 100 | mus_musculus | ENSMUSP00000028279 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |