Description

Ensembl ID MGP_PWKPhJ_G0024471 Gene ID Accession -
Symbol Gtf3c5 Alias - Full Name general transcription factor IIIC, polypeptide 5
Status Confidence Length 17228 bases Strand Minus strand
Position 2 : 25234287 - 25251514 RNA binding domain Tau95_N , Tau95
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0053019 Tau95_N PF17682 2e-29 1
MGP_PWKPhJ_P0053019 Tau95 PF09734 6.5e-41 2
MGP_PWKPhJ_P0053020 Tau95_N PF17682 3.5e-29 1
MGP_PWKPhJ_P0053020 Tau95 PF09734 6.3e-41 2
MGP_PWKPhJ_P0053024 Tau95_N PF17682 6.6e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Gtf3c5-001 MGP_PWKPhJ_T0053019 2738 513aa MGP_PWKPhJ_P0053019"/note="transcript_id=MGP_PWKPhJ_T0053019
- MGP_PWKPhJ_T0053020 2666 519aa MGP_PWKPhJ_P0053020"/note="transcript_id=MGP_PWKPhJ_T0053020
- MGP_PWKPhJ_T0053021 912 No protein -
- MGP_PWKPhJ_T0053022 600 No protein -
- MGP_PWKPhJ_T0053023 1095 No protein -
- MGP_PWKPhJ_T0053024 518 55aa MGP_PWKPhJ_P0053024"/note="transcript_id=MGP_PWKPhJ_T0053024
- MGP_PWKPhJ_T0053025 494 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0024471

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P005302099.807399.422mus_caroliMGP_CAROLIEiJ_P005056999.615499.2308
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_129s1svimjMGP_129S1SvImJ_P005356299.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_ajMGP_AJ_P005357699.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_c3hhejMGP_C3HHeJ_P005325399.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_cbajMGP_CBAJ_P005320099.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_balbcjMGP_BALBcJ_P005352299.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_fvbnjMGP_FVBNJ_P005326999.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P005302094.797794.605mus_musculus_c57bl6njMGP_C57BL6NJ_P005401299.797299.5943
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_nodshiltjMGP_NODShiLtJ_P005325599.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P005302099.229398.4586mus_pahariMGP_PahariEiJ_P006159098.65997.8927
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P005414799.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_dba2jMGP_DBA2J_P005331199.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_casteijMGP_CASTEiJ_P005342099.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_akrjMGP_AKRJ_P005353299.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P005302098.651398.6513mus_spicilegusENSMSIP0000002403399.417599.4175
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P005302096.531894.4123rattus_norvegicusENSRNOP0000001506897.281695.1456
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculus_lpjMGP_LPJ_P005341799.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_spretusMGP_SPRETEiJ_P005259899.807799.8077
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P005302094.797794.605mus_musculus_wsbeijMGP_WSBEiJ_P005253399.797299.5943
MGP_PWKPhJ_G0024471mus_musculus_pwkphjMGP_PWKPhJ_P0053020100100mus_musculusENSMUSP0000010952199.807799.8077

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression