RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0024471 | Gene ID |
|
Accession |
- |
Symbol |
Gtf3c5 |
Alias |
- |
Full Name |
general transcription factor IIIC, polypeptide 5 |
Status |
Confidence |
Length |
17228 bases |
Strand |
Minus strand |
Position |
2 : 25234287 - 25251514 |
RNA binding domain |
Tau95_N , Tau95 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0053019 |
Tau95_N |
PF17682 |
2e-29 |
1 |
MGP_PWKPhJ_P0053019 |
Tau95 |
PF09734 |
6.5e-41 |
2 |
MGP_PWKPhJ_P0053020 |
Tau95_N |
PF17682 |
3.5e-29 |
1 |
MGP_PWKPhJ_P0053020 |
Tau95 |
PF09734 |
6.3e-41 |
2 |
MGP_PWKPhJ_P0053024 |
Tau95_N |
PF17682 |
6.6e-06 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Gtf3c5-001 |
MGP_PWKPhJ_T0053019 |
2738 |
513aa |
MGP_PWKPhJ_P0053019"/note="transcript_id=MGP_PWKPhJ_T0053019 |
- |
MGP_PWKPhJ_T0053020 |
2666 |
519aa |
MGP_PWKPhJ_P0053020"/note="transcript_id=MGP_PWKPhJ_T0053020 |
- |
MGP_PWKPhJ_T0053021 |
912 |
No protein |
- |
- |
MGP_PWKPhJ_T0053022 |
600 |
No protein |
- |
- |
MGP_PWKPhJ_T0053023 |
1095 |
No protein |
- |
- |
MGP_PWKPhJ_T0053024 |
518 |
55aa |
MGP_PWKPhJ_P0053024"/note="transcript_id=MGP_PWKPhJ_T0053024 |
- |
MGP_PWKPhJ_T0053025 |
494 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0024471 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 99.8073 | 99.422 | mus_caroli | MGP_CAROLIEiJ_P0050569 | 99.6154 | 99.2308 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0053562 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0053576 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0053253 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0053200 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0053522 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0053269 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 94.7977 | 94.605 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0054012 | 99.7972 | 99.5943 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053255 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 99.2293 | 98.4586 | mus_pahari | MGP_PahariEiJ_P0061590 | 98.659 | 97.8927 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0054147 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0053311 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0053420 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0053532 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 98.6513 | 98.6513 | mus_spicilegus | ENSMSIP00000024033 | 99.4175 | 99.4175 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 96.5318 | 94.4123 | rattus_norvegicus | ENSRNOP00000015068 | 97.2816 | 95.1456 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0053417 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0052598 | 99.8077 | 99.8077 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 94.7977 | 94.605 | mus_musculus_wsbeij | MGP_WSBEiJ_P0052533 | 99.7972 | 99.5943 |
MGP_PWKPhJ_G0024471 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053020 | 100 | 100 | mus_musculus | ENSMUSP00000109521 | 99.8077 | 99.8077 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |