Description

Ensembl ID MGP_PWKPhJ_G0021833 Gene ID Accession -
Symbol Sidt1 Alias - Full Name SID1 transmembrane family, member 1
Status Confidence Length 95029 bases Strand Minus strand
Position 16 : 41171014 - 41266042 RNA binding domain SID-1_RNA_chan
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0043891 SID-1_RNA_chan PF13965 9.9e-296 1
MGP_PWKPhJ_P0043893 SID-1_RNA_chan PF13965 7e-294 1
MGP_PWKPhJ_P0043892 SID-1_RNA_chan PF13965 1.3e-232 1
MGP_PWKPhJ_P0043895 SID-1_RNA_chan PF13965 6.2e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sidt1-001 MGP_PWKPhJ_T0043891 4417 827aa MGP_PWKPhJ_P0043891"/note="transcript_id=MGP_PWKPhJ_T0043891
- MGP_PWKPhJ_T0043892 2915 445aa MGP_PWKPhJ_P0043892"/note="transcript_id=MGP_PWKPhJ_T0043892
- MGP_PWKPhJ_T0043893 4274 832aa MGP_PWKPhJ_P0043893"/note="transcript_id=MGP_PWKPhJ_T0043893
- MGP_PWKPhJ_T0043894 749 No protein -
- MGP_PWKPhJ_T0043895 404 61aa MGP_PWKPhJ_P0043895"/note="transcript_id=MGP_PWKPhJ_T0043895
- MGP_PWKPhJ_T0043896 517 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P009176071.746857.2098mus_musculus_pwkphjMGP_PWKPhJ_P004389373.557758.6538

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389399.879899.6394mus_caroliMGP_CAROLIEiJ_P004168799.879899.6394
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389399.879899.8798mus_musculus_129s1svimjMGP_129S1SvImJ_P004450099.879899.8798
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_ajMGP_AJ_P0044477100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_c3hhejMGP_C3HHeJ_P0044195100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_cbajMGP_CBAJ_P0044108100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_balbcjMGP_BALBcJ_P0044453100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_fvbnjMGP_FVBNJ_P0044216100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389399.879899.8798mus_musculus_c57bl6njMGP_C57BL6NJ_P004493599.879899.8798
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0044193100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389399.39999.1587mus_pahariMGP_PahariEiJ_P002906899.39999.1587
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0044993100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_dba2jMGP_DBA2J_P0044261100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_casteijMGP_CASTEiJ_P0044311100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_akrjMGP_AKRJ_P0044451100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389310099.8798mus_spicilegusENSMSIP0000000438810099.8798
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389393.629891.5865rattus_norvegicusENSRNOP0000000275991.647189.6471
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389399.879899.8798mus_musculus_lpjMGP_LPJ_P004433699.879899.8798
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389399.879899.7596mus_spretusMGP_SPRETEiJ_P004356499.879899.7596
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P0043893100100mus_musculus_wsbeijMGP_WSBEiJ_P0043571100100
MGP_PWKPhJ_G0021833mus_musculus_pwkphjMGP_PWKPhJ_P004389399.879899.8798mus_musculusENSMUSP0000003843399.879899.8798

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression