RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0021833 | Gene ID |
|
Accession |
- |
Symbol |
Sidt1 |
Alias |
- |
Full Name |
SID1 transmembrane family, member 1 |
Status |
Confidence |
Length |
95029 bases |
Strand |
Minus strand |
Position |
16 : 41171014 - 41266042 |
RNA binding domain |
SID-1_RNA_chan |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0043891 |
SID-1_RNA_chan |
PF13965 |
9.9e-296 |
1 |
MGP_PWKPhJ_P0043893 |
SID-1_RNA_chan |
PF13965 |
7e-294 |
1 |
MGP_PWKPhJ_P0043892 |
SID-1_RNA_chan |
PF13965 |
1.3e-232 |
1 |
MGP_PWKPhJ_P0043895 |
SID-1_RNA_chan |
PF13965 |
6.2e-07 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Sidt1-001 |
MGP_PWKPhJ_T0043891 |
4417 |
827aa |
MGP_PWKPhJ_P0043891"/note="transcript_id=MGP_PWKPhJ_T0043891 |
- |
MGP_PWKPhJ_T0043892 |
2915 |
445aa |
MGP_PWKPhJ_P0043892"/note="transcript_id=MGP_PWKPhJ_T0043892 |
- |
MGP_PWKPhJ_T0043893 |
4274 |
832aa |
MGP_PWKPhJ_P0043893"/note="transcript_id=MGP_PWKPhJ_T0043893 |
- |
MGP_PWKPhJ_T0043894 |
749 |
No protein |
- |
- |
MGP_PWKPhJ_T0043895 |
404 |
61aa |
MGP_PWKPhJ_P0043895"/note="transcript_id=MGP_PWKPhJ_T0043895 |
- |
MGP_PWKPhJ_T0043896 |
517 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0091760 | 71.7468 | 57.2098 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 73.5577 | 58.6538 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 99.8798 | 99.6394 | mus_caroli | MGP_CAROLIEiJ_P0041687 | 99.8798 | 99.6394 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 99.8798 | 99.8798 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0044500 | 99.8798 | 99.8798 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0044477 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0044195 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0044108 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0044453 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0044216 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 99.8798 | 99.8798 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0044935 | 99.8798 | 99.8798 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0044193 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 99.399 | 99.1587 | mus_pahari | MGP_PahariEiJ_P0029068 | 99.399 | 99.1587 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0044993 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0044261 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0044311 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0044451 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 99.8798 | mus_spicilegus | ENSMSIP00000004388 | 100 | 99.8798 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 93.6298 | 91.5865 | rattus_norvegicus | ENSRNOP00000002759 | 91.6471 | 89.6471 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 99.8798 | 99.8798 | mus_musculus_lpj | MGP_LPJ_P0044336 | 99.8798 | 99.8798 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 99.8798 | 99.7596 | mus_spretus | MGP_SPRETEiJ_P0043564 | 99.8798 | 99.7596 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0043571 | 100 | 100 |
MGP_PWKPhJ_G0021833 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043893 | 99.8798 | 99.8798 | mus_musculus | ENSMUSP00000038433 | 99.8798 | 99.8798 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |