Description

Ensembl ID MGP_PWKPhJ_G0021533 Gene ID Accession -
Symbol Parn Alias - Full Name poly(A)-specific ribonuclease (deadenylation nuclease)
Status Confidence Length 132781 bases Strand Minus strand
Position 16 : 10189636 - 10322416 RNA binding domain RNA_bind , CAF1 , R3H
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0042599 RNA_bind PF08675 2.3e-33 1
MGP_PWKPhJ_P0042599 CAF1 PF04857 7.9e-86 2
MGP_PWKPhJ_P0042599 R3H PF01424 5.4e-07 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Parn-201 MGP_PWKPhJ_T0042599 2888 624aa MGP_PWKPhJ_P0042599"/note="transcript_id=MGP_PWKPhJ_T0042599

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004495047.457627.6836mus_musculus_pwkphjMGP_PWKPhJ_P004259940.384623.5577
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P006678335.22518.7867mus_musculus_pwkphjMGP_PWKPhJ_P004259928.846215.3846

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259999.679599.359mus_caroliMGP_CAROLIEiJ_P004042499.679599.359
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_129s1svimjMGP_129S1SvImJ_P004321610099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_ajMGP_AJ_P004318610099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259999.839799.6795mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.6795
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259999.839799.6795mus_musculus_cbajMGP_CBAJ_P004282299.839799.6795
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.6795mus_musculus_balbcjMGP_BALBcJ_P004316910099.6795
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_fvbnjMGP_FVBNJ_P004293310099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_c57bl6njMGP_C57BL6NJ_P004365410099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_nodshiltjMGP_NODShiLtJ_P004291610099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259997.916796.9551mus_pahariMGP_PahariEiJ_P002782197.916796.9551
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_nzohlltjMGP_NZOHlLtJ_P004369610099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259999.839799.6795mus_musculus_dba2jMGP_DBA2J_P004298099.839799.6795
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.8397mus_musculus_casteijMGP_CASTEiJ_P004301210099.8397
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_akrjMGP_AKRJ_P004315910099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259999.038598.5577mus_spicilegusENSMSIP0000002565572.11271.762
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259987.179585.5769rattus_norvegicusENSRNOP0000007253984.341182.7907
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculus_lpjMGP_LPJ_P004304410099.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259999.839799.5192mus_spretusMGP_SPRETEiJ_P004227799.839799.5192
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259999.839799.359mus_musculus_wsbeijMGP_WSBEiJ_P004229699.839799.359
MGP_PWKPhJ_G0021533mus_musculus_pwkphjMGP_PWKPhJ_P004259910099.5192mus_musculusENSMUSP0000005596910099.5192

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression