Description

Ensembl ID MGP_PWKPhJ_G0020736 Gene ID Accession -
Symbol Zfr Alias - Full Name zinc finger RNA binding protein
Status Confidence Length 70730 bases Strand Plus strand
Position 15 : 9085419 - 9156148 RNA binding domain zf-met , DZF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0039963 zf-met PF12874 6.4e-21 1
MGP_PWKPhJ_P0039963 zf-met PF12874 6.4e-21 2
MGP_PWKPhJ_P0039963 zf-met PF12874 6.4e-21 3
MGP_PWKPhJ_P0039963 DZF PF07528 1.2e-69 4
MGP_PWKPhJ_P0039968 DZF PF07528 6.6e-66 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Zfr-001 MGP_PWKPhJ_T0039963 4851 1074aa MGP_PWKPhJ_P0039963"/note="transcript_id=MGP_PWKPhJ_T0039963
- MGP_PWKPhJ_T0039964 812 247aa MGP_PWKPhJ_P0039964"/note="transcript_id=MGP_PWKPhJ_T0039964
- MGP_PWKPhJ_T0039965 633 193aa MGP_PWKPhJ_P0039965"/note="transcript_id=MGP_PWKPhJ_T0039965
- MGP_PWKPhJ_T0039966 513 No protein -
- MGP_PWKPhJ_T0039967 565 114aa MGP_PWKPhJ_P0039967"/note="transcript_id=MGP_PWKPhJ_T0039967
- MGP_PWKPhJ_T0039968 897 298aa MGP_PWKPhJ_P0039968"/note="transcript_id=MGP_PWKPhJ_T0039968
- MGP_PWKPhJ_T0039969 940 43aa MGP_PWKPhJ_P0039969"/note="transcript_id=MGP_PWKPhJ_T0039969
- MGP_PWKPhJ_T0039970 667 No protein -
- MGP_PWKPhJ_T0039971 864 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00901110.4008020.200401mus_musculus_pwkphjMGP_PWKPhJ_P00399630.186220.0931099
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P006140715.87449.59253mus_musculus_pwkphjMGP_PWKPhJ_P003996317.411510.5214
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P002544161.556145.4233mus_musculus_pwkphjMGP_PWKPhJ_P003996350.093136.9646
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00902183.386812.13904mus_musculus_pwkphjMGP_PWKPhJ_P00399631.769091.11732
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P009101929.175921.8263mus_musculus_pwkphjMGP_PWKPhJ_P003996324.394818.2495
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00549273.833872.55591mus_musculus_pwkphjMGP_PWKPhJ_P00399631.117320.744879
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00355425.637583.75839mus_musculus_pwkphjMGP_PWKPhJ_P00399633.910612.60708
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00249153.938122.25035mus_musculus_pwkphjMGP_PWKPhJ_P00399632.607081.48976
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00600604.846532.74637mus_musculus_pwkphjMGP_PWKPhJ_P00399632.79331.58287
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P005401538.392928.125mus_musculus_pwkphjMGP_PWKPhJ_P003996324.022317.5978
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00588735.858593.43434mus_musculus_pwkphjMGP_PWKPhJ_P00399632.700191.58287
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P006155340.769221.7949mus_musculus_pwkphjMGP_PWKPhJ_P003996314.80457.91434
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P001801611.92986.31579mus_musculus_pwkphjMGP_PWKPhJ_P00399636.331473.35196
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P00421722.465751.91781mus_musculus_pwkphjMGP_PWKPhJ_P00399630.8379890.651769

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.813899.5345mus_caroliMGP_CAROLIEiJ_P003789899.813899.5345
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.813899.8138mus_musculus_129s1svimjMGP_129S1SvImJ_P004063199.813899.8138
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_ajMGP_AJ_P004059399.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_c3hhejMGP_C3HHeJ_P004033099.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_cbajMGP_CBAJ_P004024999.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_balbcjMGP_BALBcJ_P004059499.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_fvbnjMGP_FVBNJ_P004036199.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996322.625722.6257mus_musculus_c57bl6njMGP_C57BL6NJ_P004106198.380698.3806
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.813899.8138mus_musculus_nodshiltjMGP_NODShiLtJ_P004035299.813899.8138
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.720799.6276mus_pahariMGP_PahariEiJ_P002739599.720799.6276
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_nzohlltjMGP_NZOHlLtJ_P004110899.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_dba2jMGP_DBA2J_P004039999.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P0039963100100mus_musculus_casteijMGP_CASTEiJ_P0040367100100
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculus_akrjMGP_AKRJ_P004055499.906999.9069
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_spicilegusENSMSIP0000001649399.168299.1682
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.627699.3482rattus_norvegicusENSRNOP0000007505398.890998.6137
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.813899.8138mus_musculus_lpjMGP_LPJ_P004046599.813899.8138
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.7207mus_spretusMGP_SPRETEiJ_P003966199.906999.7207
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P0039963100100mus_musculus_wsbeijMGP_WSBEiJ_P0039733100100
MGP_PWKPhJ_G0020736mus_musculus_pwkphjMGP_PWKPhJ_P003996399.906999.9069mus_musculusENSMUSP0000011891199.906999.9069

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression