RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0020736 | Gene ID |
|
Accession |
- |
Symbol |
Zfr |
Alias |
- |
Full Name |
zinc finger RNA binding protein |
Status |
Confidence |
Length |
70730 bases |
Strand |
Plus strand |
Position |
15 : 9085419 - 9156148 |
RNA binding domain |
zf-met , DZF |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0039963 |
zf-met |
PF12874 |
6.4e-21 |
1 |
MGP_PWKPhJ_P0039963 |
zf-met |
PF12874 |
6.4e-21 |
2 |
MGP_PWKPhJ_P0039963 |
zf-met |
PF12874 |
6.4e-21 |
3 |
MGP_PWKPhJ_P0039963 |
DZF |
PF07528 |
1.2e-69 |
4 |
MGP_PWKPhJ_P0039968 |
DZF |
PF07528 |
6.6e-66 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Zfr-001 |
MGP_PWKPhJ_T0039963 |
4851 |
1074aa |
MGP_PWKPhJ_P0039963"/note="transcript_id=MGP_PWKPhJ_T0039963 |
- |
MGP_PWKPhJ_T0039964 |
812 |
247aa |
MGP_PWKPhJ_P0039964"/note="transcript_id=MGP_PWKPhJ_T0039964 |
- |
MGP_PWKPhJ_T0039965 |
633 |
193aa |
MGP_PWKPhJ_P0039965"/note="transcript_id=MGP_PWKPhJ_T0039965 |
- |
MGP_PWKPhJ_T0039966 |
513 |
No protein |
- |
- |
MGP_PWKPhJ_T0039967 |
565 |
114aa |
MGP_PWKPhJ_P0039967"/note="transcript_id=MGP_PWKPhJ_T0039967 |
- |
MGP_PWKPhJ_T0039968 |
897 |
298aa |
MGP_PWKPhJ_P0039968"/note="transcript_id=MGP_PWKPhJ_T0039968 |
- |
MGP_PWKPhJ_T0039969 |
940 |
43aa |
MGP_PWKPhJ_P0039969"/note="transcript_id=MGP_PWKPhJ_T0039969 |
- |
MGP_PWKPhJ_T0039970 |
667 |
No protein |
- |
- |
MGP_PWKPhJ_T0039971 |
864 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090111 | 0.400802 | 0.200401 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 0.18622 | 0.0931099 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0061407 | 15.8744 | 9.59253 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 17.4115 | 10.5214 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0025441 | 61.5561 | 45.4233 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 50.0931 | 36.9646 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0090218 | 3.38681 | 2.13904 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 1.76909 | 1.11732 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0091019 | 29.1759 | 21.8263 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 24.3948 | 18.2495 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054927 | 3.83387 | 2.55591 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 1.11732 | 0.744879 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0035542 | 5.63758 | 3.75839 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 3.91061 | 2.60708 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024915 | 3.93812 | 2.25035 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 2.60708 | 1.48976 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0060060 | 4.84653 | 2.74637 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 2.7933 | 1.58287 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0054015 | 38.3929 | 28.125 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 24.0223 | 17.5978 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0058873 | 5.85859 | 3.43434 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 2.70019 | 1.58287 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0061553 | 40.7692 | 21.7949 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 14.8045 | 7.91434 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0018016 | 11.9298 | 6.31579 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 6.33147 | 3.35196 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0042172 | 2.46575 | 1.91781 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 0.837989 | 0.651769 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.8138 | 99.5345 | mus_caroli | MGP_CAROLIEiJ_P0037898 | 99.8138 | 99.5345 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.8138 | 99.8138 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0040631 | 99.8138 | 99.8138 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_aj | MGP_AJ_P0040593 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_c3hhej | MGP_C3HHeJ_P0040330 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_cbaj | MGP_CBAJ_P0040249 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_balbcj | MGP_BALBcJ_P0040594 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_fvbnj | MGP_FVBNJ_P0040361 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 22.6257 | 22.6257 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0041061 | 98.3806 | 98.3806 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.8138 | 99.8138 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0040352 | 99.8138 | 99.8138 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.7207 | 99.6276 | mus_pahari | MGP_PahariEiJ_P0027395 | 99.7207 | 99.6276 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0041108 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_dba2j | MGP_DBA2J_P0040399 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0040367 | 100 | 100 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus_akrj | MGP_AKRJ_P0040554 | 99.9069 | 99.9069 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_spicilegus | ENSMSIP00000016493 | 99.1682 | 99.1682 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.6276 | 99.3482 | rattus_norvegicus | ENSRNOP00000075053 | 98.8909 | 98.6137 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.8138 | 99.8138 | mus_musculus_lpj | MGP_LPJ_P0040465 | 99.8138 | 99.8138 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.7207 | mus_spretus | MGP_SPRETEiJ_P0039661 | 99.9069 | 99.7207 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0039733 | 100 | 100 |
MGP_PWKPhJ_G0020736 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039963 | 99.9069 | 99.9069 | mus_musculus | ENSMUSP00000118911 | 99.9069 | 99.9069 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |