RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0020526 | Gene ID |
|
Accession |
- |
Symbol |
R3hcc1 |
Alias |
- |
Full Name |
R3H domain and coiled-coil containing 1 |
Status |
Confidence |
Length |
10883 bases |
Strand |
Minus strand |
Position |
14 : 59090664 - 59101546 |
RNA binding domain |
R3H |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0039321 |
R3H |
PF01424 |
7.1e-16 |
1 |
MGP_PWKPhJ_P0039322 |
R3H |
PF01424 |
7.1e-16 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
R3hcc1-001 |
MGP_PWKPhJ_T0039321 |
1726 |
488aa |
MGP_PWKPhJ_P0039321"/note="transcript_id=MGP_PWKPhJ_T0039321 |
- |
MGP_PWKPhJ_T0039322 |
1958 |
488aa |
MGP_PWKPhJ_P0039322"/note="transcript_id=MGP_PWKPhJ_T0039322 |
- |
MGP_PWKPhJ_T0039323 |
410 |
No protein |
- |
- |
MGP_PWKPhJ_T0039324 |
814 |
No protein |
- |
- |
MGP_PWKPhJ_T0039325 |
440 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0051243 | 25.1613 | 14.5806 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 39.959 | 23.1557 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 98.7705 | 96.9262 | mus_caroli | MGP_CAROLIEiJ_P0037261 | 98.7705 | 96.9262 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0039997 | 100 | 100 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_aj | MGP_AJ_P0039967 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_c3hhej | MGP_C3HHeJ_P0039707 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_cbaj | MGP_CBAJ_P0039623 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_balbcj | MGP_BALBcJ_P0039966 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_fvbnj | MGP_FVBNJ_P0039735 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0040442 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0039729 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 95.2869 | 91.3934 | mus_pahari | MGP_PahariEiJ_P0085356 | 94.1296 | 90.2834 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0040478 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_dba2j | MGP_DBA2J_P0039768 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 99.5902 | 98.5656 | mus_musculus_casteij | MGP_CASTEiJ_P0039712 | 99.5902 | 98.5656 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_musculus_akrj | MGP_AKRJ_P0039922 | 100 | 98.9754 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 99.5902 | 98.5656 | mus_spicilegus | ENSMSIP00000029388 | 96.8128 | 95.8167 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 93.4426 | 86.8852 | rattus_norvegicus | ENSRNOP00000022706 | 76.8971 | 71.5008 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0039843 | 100 | 100 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.9754 | mus_spretus | MGP_SPRETEiJ_P0038995 | 99.389 | 98.3707 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 99.7951 | 98.7705 | mus_musculus_wsbeij | MGP_WSBEiJ_P0039098 | 99.7951 | 98.7705 |
MGP_PWKPhJ_G0020526 | mus_musculus_pwkphj | MGP_PWKPhJ_P0039322 | 100 | 98.7705 | mus_musculus | ENSMUSP00000113898 | 100 | 98.7705 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |