Description

Ensembl ID MGP_PWKPhJ_G0020526 Gene ID Accession -
Symbol R3hcc1 Alias - Full Name R3H domain and coiled-coil containing 1
Status Confidence Length 10883 bases Strand Minus strand
Position 14 : 59090664 - 59101546 RNA binding domain R3H
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0039321 R3H PF01424 7.1e-16 1
MGP_PWKPhJ_P0039322 R3H PF01424 7.1e-16 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
R3hcc1-001 MGP_PWKPhJ_T0039321 1726 488aa MGP_PWKPhJ_P0039321"/note="transcript_id=MGP_PWKPhJ_T0039321
- MGP_PWKPhJ_T0039322 1958 488aa MGP_PWKPhJ_P0039322"/note="transcript_id=MGP_PWKPhJ_T0039322
- MGP_PWKPhJ_T0039323 410 No protein -
- MGP_PWKPhJ_T0039324 814 No protein -
- MGP_PWKPhJ_T0039325 440 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P005124325.161314.5806mus_musculus_pwkphjMGP_PWKPhJ_P003932239.95923.1557

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932298.770596.9262mus_caroliMGP_CAROLIEiJ_P003726198.770596.9262
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P0039322100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0039997100100
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_ajMGP_AJ_P003996710098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_c3hhejMGP_C3HHeJ_P003970710098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_cbajMGP_CBAJ_P003962310098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_balbcjMGP_BALBcJ_P003996610098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_fvbnjMGP_FVBNJ_P003973510098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_c57bl6njMGP_C57BL6NJ_P004044210098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_nodshiltjMGP_NODShiLtJ_P003972910098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932295.286991.3934mus_pahariMGP_PahariEiJ_P008535694.129690.2834
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_nzohlltjMGP_NZOHlLtJ_P004047810098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_dba2jMGP_DBA2J_P003976810098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932299.590298.5656mus_musculus_casteijMGP_CASTEiJ_P003971299.590298.5656
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_musculus_akrjMGP_AKRJ_P003992210098.9754
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932299.590298.5656mus_spicilegusENSMSIP0000002938896.812895.8167
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932293.442686.8852rattus_norvegicusENSRNOP0000002270676.897171.5008
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P0039322100100mus_musculus_lpjMGP_LPJ_P0039843100100
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.9754mus_spretusMGP_SPRETEiJ_P003899599.38998.3707
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932299.795198.7705mus_musculus_wsbeijMGP_WSBEiJ_P003909899.795198.7705
MGP_PWKPhJ_G0020526mus_musculus_pwkphjMGP_PWKPhJ_P003932210098.7705mus_musculusENSMUSP0000011389810098.7705

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression