RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_PWKPhJ_G0018045	Gene ID		Accession	-
Symbol	Mrpl27	Alias	-	Full Name	mitochondrial ribosomal protein L27
Status	Confidence	Length	6389 bases	Strand	Plus strand
Position	11 : 93398223 - 93404611	RNA binding domain	Ribosomal_L27
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
MGP_PWKPhJ_P0030991	Ribosomal_L27	PF01016	2.2e-25	1
MGP_PWKPhJ_P0030992	Ribosomal_L27	PF01016	2.2e-25	1

Showing 1 to 2 of 2 entries

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
-	MGP_PWKPhJ_T0030992	511	148aa	MGP_PWKPhJ_P0030992"/note="transcript_id=MGP_PWKPhJ_T0030992
-	MGP_PWKPhJ_T0030993	656	No protein	-
-	MGP_PWKPhJ_T0030994	442	No protein	-
-	MGP_PWKPhJ_T0030995	439	No protein	-
Mrpl27-001	MGP_PWKPhJ_T0030991	757	148aa	MGP_PWKPhJ_P0030991"/note="transcript_id=MGP_PWKPhJ_T0030991

Showing 1 to 5 of 5 entries

Gene Model

Click here to download MGP_PWKPhJ_G0018045's gene model file

Protein-Protein Interaction (PPI)

Click here to download MGP_PWKPhJ_G0018045's PPI file

Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	99.3243	mus_caroli	MGP_CAROLIEiJ_P0029303	100	99.3243
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	100	mus_musculus_129s1svimj	MGP_129S1SvImJ_P0031765	100	100
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	100	mus_musculus_aj	MGP_AJ_P0031710	100	100
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	100	mus_musculus_c3hhej	MGP_C3HHeJ_P0031498	100	100
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	100	mus_musculus_cbaj	MGP_CBAJ_P0031413	100	100
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	100	mus_musculus_balbcj	MGP_BALBcJ_P0031699	100	100
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	91.2162	91.2162	mus_musculus_fvbnj	MGP_FVBNJ_P0031545	91.2162	91.2162
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	100	mus_musculus_c57bl6nj	MGP_C57BL6NJ_P0032219	100	100
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	100	100	mus_musculus_nodshiltj	MGP_NODShiLtJ_P0031525	100	100
MGP_PWKPhJ_G0018045	mus_musculus_pwkphj	MGP_PWKPhJ_P0030991	99.3243	97.2973	mus_pahari	MGP_PahariEiJ_P0036015	98.6577	96.6443

Showing 1 to 10 of 20 entries

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Contents

Description
RBDs
Transcripts
Gene Model
PPI
Orthologs