RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_PWKPhJ_G0017339	Gene ID		Accession	-
Symbol	Cby3	Alias	-	Full Name	chibby homolog 3 (Drosophila)
Status	Confidence	Length	5286 bases	Strand	Plus strand
Position	11 : 47829998 - 47835283	RNA binding domain	Chibby
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_PWKPhJ_P0027969	Chibby	PF14645	1.7e-34	1
MGP_PWKPhJ_P0027970	Chibby	PF14645	7.7e-27	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Cby3-001	MGP_PWKPhJ_T0027969	731	235aa	MGP_PWKPhJ_P0027969"/note="transcript_id=MGP_PWKPhJ_T0027969
-	MGP_PWKPhJ_T0027970	703	140aa	MGP_PWKPhJ_P0027970"/note="transcript_id=MGP_PWKPhJ_T0027970

Gene Model

Click here to download MGP_PWKPhJ_G0017339's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_PWKPhJ_G0017339's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_PWKPhJ_G0017339

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_PWKPhJ_G0017339

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression