RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0016930 | Gene ID |
|
Accession |
- |
Symbol |
R3hdm2 |
Alias |
- |
Full Name |
R3H domain containing 2 |
Status |
Confidence |
Length |
124071 bases |
Strand |
Plus strand |
Position |
10 : 125023964 - 125148034 |
RNA binding domain |
R3H , SUZ |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0026422 |
R3H |
PF01424 |
1e-09 |
1 |
MGP_PWKPhJ_P0026417 |
R3H |
PF01424 |
1e-09 |
1 |
MGP_PWKPhJ_P0026418 |
R3H |
PF01424 |
1e-09 |
1 |
MGP_PWKPhJ_P0026413 |
R3H |
PF01424 |
1.1e-09 |
1 |
MGP_PWKPhJ_P0026413 |
SUZ |
PF12752 |
2.3e-10 |
2 |
MGP_PWKPhJ_P0026414 |
R3H |
PF01424 |
1.1e-09 |
1 |
MGP_PWKPhJ_P0026414 |
SUZ |
PF12752 |
2.3e-10 |
2 |
MGP_PWKPhJ_P0026421 |
R3H |
PF01424 |
1.1e-09 |
1 |
MGP_PWKPhJ_P0026421 |
SUZ |
PF12752 |
2.2e-10 |
2 |
MGP_PWKPhJ_P0026415 |
R3H |
PF01424 |
1.1e-09 |
1 |
MGP_PWKPhJ_P0026415 |
SUZ |
PF12752 |
2.2e-10 |
2 |
MGP_PWKPhJ_P0026423 |
R3H |
PF01424 |
1.1e-09 |
1 |
MGP_PWKPhJ_P0026423 |
SUZ |
PF12752 |
2.2e-10 |
2 |
MGP_PWKPhJ_P0026424 |
SUZ |
PF12752 |
2.1e-10 |
1 |
MGP_PWKPhJ_P0026426 |
SUZ |
PF12752 |
1.4e-08 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
R3hdm2-001 |
MGP_PWKPhJ_T0026412 |
407 |
27aa |
MGP_PWKPhJ_P0026412"/note="transcript_id=MGP_PWKPhJ_T0026412 |
- |
MGP_PWKPhJ_T0026413 |
4085 |
1043aa |
MGP_PWKPhJ_P0026413"/note="transcript_id=MGP_PWKPhJ_T0026413 |
- |
MGP_PWKPhJ_T0026414 |
4024 |
1043aa |
MGP_PWKPhJ_P0026414"/note="transcript_id=MGP_PWKPhJ_T0026414 |
- |
MGP_PWKPhJ_T0026415 |
3970 |
1025aa |
MGP_PWKPhJ_P0026415"/note="transcript_id=MGP_PWKPhJ_T0026415 |
- |
MGP_PWKPhJ_T0026416 |
322 |
62aa |
MGP_PWKPhJ_P0026416"/note="transcript_id=MGP_PWKPhJ_T0026416 |
- |
MGP_PWKPhJ_T0026417 |
4171 |
998aa |
MGP_PWKPhJ_P0026417"/note="transcript_id=MGP_PWKPhJ_T0026417 |
- |
MGP_PWKPhJ_T0026418 |
3636 |
1011aa |
MGP_PWKPhJ_P0026418"/note="transcript_id=MGP_PWKPhJ_T0026418 |
- |
MGP_PWKPhJ_T0026419 |
447 |
98aa |
MGP_PWKPhJ_P0026419"/note="transcript_id=MGP_PWKPhJ_T0026419 |
- |
MGP_PWKPhJ_T0026420 |
2903 |
102aa |
MGP_PWKPhJ_P0026420"/note="transcript_id=MGP_PWKPhJ_T0026420 |
- |
MGP_PWKPhJ_T0026421 |
3649 |
991aa |
MGP_PWKPhJ_P0026421"/note="transcript_id=MGP_PWKPhJ_T0026421 |
- |
MGP_PWKPhJ_T0026422 |
2934 |
977aa |
MGP_PWKPhJ_P0026422"/note="transcript_id=MGP_PWKPhJ_T0026422 |
- |
MGP_PWKPhJ_T0026423 |
3734 |
1025aa |
MGP_PWKPhJ_P0026423"/note="transcript_id=MGP_PWKPhJ_T0026423 |
- |
MGP_PWKPhJ_T0026424 |
273 |
91aa |
MGP_PWKPhJ_P0026424"/note="transcript_id=MGP_PWKPhJ_T0026424 |
- |
MGP_PWKPhJ_T0026425 |
395 |
No protein |
- |
- |
MGP_PWKPhJ_T0026426 |
2901 |
742aa |
MGP_PWKPhJ_P0026426"/note="transcript_id=MGP_PWKPhJ_T0026426 |
- |
MGP_PWKPhJ_T0026427 |
871 |
No protein |
- |
- |
MGP_PWKPhJ_T0026428 |
764 |
No protein |
- |
- |
MGP_PWKPhJ_T0026429 |
542 |
No protein |
- |
- |
MGP_PWKPhJ_T0026430 |
462 |
154aa |
MGP_PWKPhJ_P0026430"/note="transcript_id=MGP_PWKPhJ_T0026430 |
- |
MGP_PWKPhJ_T0026431 |
936 |
263aa |
MGP_PWKPhJ_P0026431"/note="transcript_id=MGP_PWKPhJ_T0026431 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0020885 | 63.9648 | 48.7225 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 69.6069 | 53.0201 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0094645 | 56.5724 | 42.4293 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 32.5983 | 24.4487 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.6165 | 99.0412 | mus_caroli | MGP_CAROLIEiJ_P0025016 | 99.4258 | 98.8517 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0027359 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_aj | MGP_AJ_P0027327 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_cbaj | MGP_CBAJ_P0027044 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 98.1783 | 98.0825 | mus_musculus_balbcj | MGP_BALBcJ_P0027308 | 99.8051 | 99.7076 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_fvbnj | MGP_FVBNJ_P0027158 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027810 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0027138 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 98.9454 | 98.0825 | mus_pahari | MGP_PahariEiJ_P0087639 | 99.1354 | 98.2709 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0027834 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_dba2j | MGP_DBA2J_P0027163 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_casteij | MGP_CASTEiJ_P0026712 | 99.9041 | 99.8082 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_akrj | MGP_AKRJ_P0027302 | 97.2015 | 97.1082 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.8082 | 99.5206 | mus_spicilegus | ENSMSIP00000002418 | 99.8082 | 99.5206 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 98.466 | 97.2196 | rattus_norvegicus | ENSRNOP00000073015 | 98.2775 | 97.0335 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_lpj | MGP_LPJ_P0027281 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.8082 | 99.6165 | mus_spretus | MGP_SPRETEiJ_P0026294 | 99.522 | 99.3308 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus_wsbeij | MGP_WSBEiJ_P0026636 | 99.8084 | 99.7126 |
MGP_PWKPhJ_G0016930 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 | mus_musculus | ENSMUSP00000126608 | 99.8084 | 99.7126 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |