Description

Ensembl ID MGP_PWKPhJ_G0016930 Gene ID Accession -
Symbol R3hdm2 Alias - Full Name R3H domain containing 2
Status Confidence Length 124071 bases Strand Plus strand
Position 10 : 125023964 - 125148034 RNA binding domain R3H , SUZ
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0026422 R3H PF01424 1e-09 1
MGP_PWKPhJ_P0026417 R3H PF01424 1e-09 1
MGP_PWKPhJ_P0026418 R3H PF01424 1e-09 1
MGP_PWKPhJ_P0026413 R3H PF01424 1.1e-09 1
MGP_PWKPhJ_P0026413 SUZ PF12752 2.3e-10 2
MGP_PWKPhJ_P0026414 R3H PF01424 1.1e-09 1
MGP_PWKPhJ_P0026414 SUZ PF12752 2.3e-10 2
MGP_PWKPhJ_P0026421 R3H PF01424 1.1e-09 1
MGP_PWKPhJ_P0026421 SUZ PF12752 2.2e-10 2
MGP_PWKPhJ_P0026415 R3H PF01424 1.1e-09 1
MGP_PWKPhJ_P0026415 SUZ PF12752 2.2e-10 2
MGP_PWKPhJ_P0026423 R3H PF01424 1.1e-09 1
MGP_PWKPhJ_P0026423 SUZ PF12752 2.2e-10 2
MGP_PWKPhJ_P0026424 SUZ PF12752 2.1e-10 1
MGP_PWKPhJ_P0026426 SUZ PF12752 1.4e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
R3hdm2-001 MGP_PWKPhJ_T0026412 407 27aa MGP_PWKPhJ_P0026412"/note="transcript_id=MGP_PWKPhJ_T0026412
- MGP_PWKPhJ_T0026413 4085 1043aa MGP_PWKPhJ_P0026413"/note="transcript_id=MGP_PWKPhJ_T0026413
- MGP_PWKPhJ_T0026414 4024 1043aa MGP_PWKPhJ_P0026414"/note="transcript_id=MGP_PWKPhJ_T0026414
- MGP_PWKPhJ_T0026415 3970 1025aa MGP_PWKPhJ_P0026415"/note="transcript_id=MGP_PWKPhJ_T0026415
- MGP_PWKPhJ_T0026416 322 62aa MGP_PWKPhJ_P0026416"/note="transcript_id=MGP_PWKPhJ_T0026416
- MGP_PWKPhJ_T0026417 4171 998aa MGP_PWKPhJ_P0026417"/note="transcript_id=MGP_PWKPhJ_T0026417
- MGP_PWKPhJ_T0026418 3636 1011aa MGP_PWKPhJ_P0026418"/note="transcript_id=MGP_PWKPhJ_T0026418
- MGP_PWKPhJ_T0026419 447 98aa MGP_PWKPhJ_P0026419"/note="transcript_id=MGP_PWKPhJ_T0026419
- MGP_PWKPhJ_T0026420 2903 102aa MGP_PWKPhJ_P0026420"/note="transcript_id=MGP_PWKPhJ_T0026420
- MGP_PWKPhJ_T0026421 3649 991aa MGP_PWKPhJ_P0026421"/note="transcript_id=MGP_PWKPhJ_T0026421
- MGP_PWKPhJ_T0026422 2934 977aa MGP_PWKPhJ_P0026422"/note="transcript_id=MGP_PWKPhJ_T0026422
- MGP_PWKPhJ_T0026423 3734 1025aa MGP_PWKPhJ_P0026423"/note="transcript_id=MGP_PWKPhJ_T0026423
- MGP_PWKPhJ_T0026424 273 91aa MGP_PWKPhJ_P0026424"/note="transcript_id=MGP_PWKPhJ_T0026424
- MGP_PWKPhJ_T0026425 395 No protein -
- MGP_PWKPhJ_T0026426 2901 742aa MGP_PWKPhJ_P0026426"/note="transcript_id=MGP_PWKPhJ_T0026426
- MGP_PWKPhJ_T0026427 871 No protein -
- MGP_PWKPhJ_T0026428 764 No protein -
- MGP_PWKPhJ_T0026429 542 No protein -
- MGP_PWKPhJ_T0026430 462 154aa MGP_PWKPhJ_P0026430"/note="transcript_id=MGP_PWKPhJ_T0026430
- MGP_PWKPhJ_T0026431 936 263aa MGP_PWKPhJ_P0026431"/note="transcript_id=MGP_PWKPhJ_T0026431

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002088563.964848.7225mus_musculus_pwkphjMGP_PWKPhJ_P002641369.606953.0201
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P009464556.572442.4293mus_musculus_pwkphjMGP_PWKPhJ_P002641332.598324.4487

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.616599.0412mus_caroliMGP_CAROLIEiJ_P002501699.425898.8517
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_129s1svimjMGP_129S1SvImJ_P002735999.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_ajMGP_AJ_P002732799.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_c3hhejMGP_C3HHeJ_P002711599.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_cbajMGP_CBAJ_P002704499.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641398.178398.0825mus_musculus_balbcjMGP_BALBcJ_P002730899.805199.7076
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_fvbnjMGP_FVBNJ_P002715899.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_c57bl6njMGP_C57BL6NJ_P002781099.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_nodshiltjMGP_NODShiLtJ_P002713899.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641398.945498.0825mus_pahariMGP_PahariEiJ_P008763999.135498.2709
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_nzohlltjMGP_NZOHlLtJ_P002783499.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_dba2jMGP_DBA2J_P002716399.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_casteijMGP_CASTEiJ_P002671299.904199.8082
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_akrjMGP_AKRJ_P002730297.201597.1082
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.808299.5206mus_spicilegusENSMSIP0000000241899.808299.5206
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641398.46697.2196rattus_norvegicusENSRNOP0000007301598.277597.0335
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_lpjMGP_LPJ_P002728199.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.808299.6165mus_spretusMGP_SPRETEiJ_P002629499.52299.3308
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculus_wsbeijMGP_WSBEiJ_P002663699.808499.7126
MGP_PWKPhJ_G0016930mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082mus_musculusENSMUSP0000012660899.808499.7126

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression