RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0016505 | Gene ID |
|
Accession |
- |
Symbol |
Pcbp3 |
Alias |
- |
Full Name |
poly(rC) binding protein 3 |
Status |
Confidence |
Length |
199165 bases |
Strand |
Minus strand |
Position |
10 : 73512314 - 73711478 |
RNA binding domain |
KH_2 , KH_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0024885 |
KH_2 |
PF07650 |
3.9e-15 |
1 |
MGP_PWKPhJ_P0024885 |
KH_1 |
PF00013 |
5.1e-55 |
2 |
MGP_PWKPhJ_P0024885 |
KH_1 |
PF00013 |
5.1e-55 |
3 |
MGP_PWKPhJ_P0024885 |
KH_1 |
PF00013 |
5.1e-55 |
4 |
MGP_PWKPhJ_P0024882 |
KH_2 |
PF07650 |
3.9e-15 |
1 |
MGP_PWKPhJ_P0024882 |
KH_1 |
PF00013 |
5.2e-55 |
2 |
MGP_PWKPhJ_P0024882 |
KH_1 |
PF00013 |
5.2e-55 |
3 |
MGP_PWKPhJ_P0024882 |
KH_1 |
PF00013 |
5.2e-55 |
4 |
MGP_PWKPhJ_P0024884 |
KH_2 |
PF07650 |
3.9e-15 |
1 |
MGP_PWKPhJ_P0024884 |
KH_1 |
PF00013 |
5.2e-55 |
2 |
MGP_PWKPhJ_P0024884 |
KH_1 |
PF00013 |
5.2e-55 |
3 |
MGP_PWKPhJ_P0024884 |
KH_1 |
PF00013 |
5.2e-55 |
4 |
MGP_PWKPhJ_P0024888 |
KH_2 |
PF07650 |
5.7e-15 |
1 |
MGP_PWKPhJ_P0024888 |
KH_1 |
PF00013 |
6.8e-55 |
2 |
MGP_PWKPhJ_P0024888 |
KH_1 |
PF00013 |
6.8e-55 |
3 |
MGP_PWKPhJ_P0024888 |
KH_1 |
PF00013 |
6.8e-55 |
4 |
MGP_PWKPhJ_P0024889 |
KH_2 |
PF07650 |
5.8e-11 |
1 |
MGP_PWKPhJ_P0024889 |
KH_1 |
PF00013 |
5.6e-37 |
2 |
MGP_PWKPhJ_P0024889 |
KH_1 |
PF00013 |
5.6e-37 |
3 |
MGP_PWKPhJ_P0024887 |
KH_1 |
PF00013 |
9.7e-19 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Pcbp3-001 |
MGP_PWKPhJ_T0024882 |
2013 |
371aa |
MGP_PWKPhJ_P0024882"/note="transcript_id=MGP_PWKPhJ_T0024882 |
- |
MGP_PWKPhJ_T0024883 |
1736 |
No protein |
- |
- |
MGP_PWKPhJ_T0024884 |
1748 |
371aa |
MGP_PWKPhJ_P0024884"/note="transcript_id=MGP_PWKPhJ_T0024884 |
- |
MGP_PWKPhJ_T0024885 |
2544 |
370aa |
MGP_PWKPhJ_P0024885"/note="transcript_id=MGP_PWKPhJ_T0024885 |
- |
MGP_PWKPhJ_T0024886 |
1095 |
No protein |
- |
- |
MGP_PWKPhJ_T0024887 |
605 |
160aa |
MGP_PWKPhJ_P0024887"/note="transcript_id=MGP_PWKPhJ_T0024887 |
- |
MGP_PWKPhJ_T0024888 |
1442 |
394aa |
MGP_PWKPhJ_P0024888"/note="transcript_id=MGP_PWKPhJ_T0024888 |
- |
MGP_PWKPhJ_T0024889 |
944 |
226aa |
MGP_PWKPhJ_P0024889"/note="transcript_id=MGP_PWKPhJ_T0024889 |
- |
MGP_PWKPhJ_T0024890 |
716 |
No protein |
- |
- |
MGP_PWKPhJ_T0024891 |
337 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0078229 | 77.809 | 67.4157 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 74.6631 | 64.69 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0034088 | 30.3748 | 19.1322 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 41.5094 | 26.1456 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0077109 | 22.7979 | 12.6079 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 35.5795 | 19.6765 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0093762 | 60.0496 | 48.6352 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 65.2291 | 52.8302 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0084389 | 26.7986 | 17.2662 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 40.1617 | 25.876 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0036576 | 36.4238 | 23.1788 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 44.4744 | 28.3019 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0053439 | 23.8261 | 13.0435 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 36.9272 | 20.2156 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0047668 | 18.5323 | 10.5721 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 40.1617 | 22.9111 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0081475 | 31.7073 | 19.3089 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 42.0485 | 25.6065 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0081474 | 29.1209 | 17.9487 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 42.8571 | 26.4151 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0043219 | 24.3243 | 14.3581 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 38.814 | 22.9111 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0063809 | 21.4067 | 12.2324 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 37.7358 | 21.5633 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0031099 | 23.2236 | 11.6118 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 36.1186 | 18.0593 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0042154 | 80.663 | 72.6519 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 78.7062 | 70.8895 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 99.7305 | 99.7305 | mus_caroli | MGP_CAROLIEiJ_P0023523 | 99.7305 | 99.7305 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0025856 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0025833 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0025606 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0025541 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0025797 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0025648 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0026293 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0025651 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 99.7305 | 99.7305 | mus_pahari | MGP_PahariEiJ_P0086684 | 99.7305 | 99.7305 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0026339 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0025655 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0025170 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0025794 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 94.3396 | 94.3396 | mus_spicilegus | ENSMSIP00000035121 | 93.5829 | 93.5829 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 99.4609 | 99.4609 | rattus_norvegicus | ENSRNOP00000082318 | 97.3615 | 97.3615 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0025770 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 99.7305 | 99.7305 | mus_spretus | MGP_SPRETEiJ_P0024672 | 99.7305 | 99.7305 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0025147 | 100 | 100 |
MGP_PWKPhJ_G0016505 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024882 | 100 | 100 | mus_musculus | ENSMUSP00000001148 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |