Description

Ensembl ID MGP_PWKPhJ_G0016505 Gene ID Accession -
Symbol Pcbp3 Alias - Full Name poly(rC) binding protein 3
Status Confidence Length 199165 bases Strand Minus strand
Position 10 : 73512314 - 73711478 RNA binding domain KH_2 , KH_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0024885 KH_2 PF07650 3.9e-15 1
MGP_PWKPhJ_P0024885 KH_1 PF00013 5.1e-55 2
MGP_PWKPhJ_P0024885 KH_1 PF00013 5.1e-55 3
MGP_PWKPhJ_P0024885 KH_1 PF00013 5.1e-55 4
MGP_PWKPhJ_P0024882 KH_2 PF07650 3.9e-15 1
MGP_PWKPhJ_P0024882 KH_1 PF00013 5.2e-55 2
MGP_PWKPhJ_P0024882 KH_1 PF00013 5.2e-55 3
MGP_PWKPhJ_P0024882 KH_1 PF00013 5.2e-55 4
MGP_PWKPhJ_P0024884 KH_2 PF07650 3.9e-15 1
MGP_PWKPhJ_P0024884 KH_1 PF00013 5.2e-55 2
MGP_PWKPhJ_P0024884 KH_1 PF00013 5.2e-55 3
MGP_PWKPhJ_P0024884 KH_1 PF00013 5.2e-55 4
MGP_PWKPhJ_P0024888 KH_2 PF07650 5.7e-15 1
MGP_PWKPhJ_P0024888 KH_1 PF00013 6.8e-55 2
MGP_PWKPhJ_P0024888 KH_1 PF00013 6.8e-55 3
MGP_PWKPhJ_P0024888 KH_1 PF00013 6.8e-55 4
MGP_PWKPhJ_P0024889 KH_2 PF07650 5.8e-11 1
MGP_PWKPhJ_P0024889 KH_1 PF00013 5.6e-37 2
MGP_PWKPhJ_P0024889 KH_1 PF00013 5.6e-37 3
MGP_PWKPhJ_P0024887 KH_1 PF00013 9.7e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Pcbp3-001 MGP_PWKPhJ_T0024882 2013 371aa MGP_PWKPhJ_P0024882"/note="transcript_id=MGP_PWKPhJ_T0024882
- MGP_PWKPhJ_T0024883 1736 No protein -
- MGP_PWKPhJ_T0024884 1748 371aa MGP_PWKPhJ_P0024884"/note="transcript_id=MGP_PWKPhJ_T0024884
- MGP_PWKPhJ_T0024885 2544 370aa MGP_PWKPhJ_P0024885"/note="transcript_id=MGP_PWKPhJ_T0024885
- MGP_PWKPhJ_T0024886 1095 No protein -
- MGP_PWKPhJ_T0024887 605 160aa MGP_PWKPhJ_P0024887"/note="transcript_id=MGP_PWKPhJ_T0024887
- MGP_PWKPhJ_T0024888 1442 394aa MGP_PWKPhJ_P0024888"/note="transcript_id=MGP_PWKPhJ_T0024888
- MGP_PWKPhJ_T0024889 944 226aa MGP_PWKPhJ_P0024889"/note="transcript_id=MGP_PWKPhJ_T0024889
- MGP_PWKPhJ_T0024890 716 No protein -
- MGP_PWKPhJ_T0024891 337 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P007822977.80967.4157mus_musculus_pwkphjMGP_PWKPhJ_P002488274.663164.69
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P003408830.374819.1322mus_musculus_pwkphjMGP_PWKPhJ_P002488241.509426.1456
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P007710922.797912.6079mus_musculus_pwkphjMGP_PWKPhJ_P002488235.579519.6765
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P009376260.049648.6352mus_musculus_pwkphjMGP_PWKPhJ_P002488265.229152.8302
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P008438926.798617.2662mus_musculus_pwkphjMGP_PWKPhJ_P002488240.161725.876
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P003657636.423823.1788mus_musculus_pwkphjMGP_PWKPhJ_P002488244.474428.3019
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P005343923.826113.0435mus_musculus_pwkphjMGP_PWKPhJ_P002488236.927220.2156
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P004766818.532310.5721mus_musculus_pwkphjMGP_PWKPhJ_P002488240.161722.9111
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P008147531.707319.3089mus_musculus_pwkphjMGP_PWKPhJ_P002488242.048525.6065
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P008147429.120917.9487mus_musculus_pwkphjMGP_PWKPhJ_P002488242.857126.4151
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P004321924.324314.3581mus_musculus_pwkphjMGP_PWKPhJ_P002488238.81422.9111
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P006380921.406712.2324mus_musculus_pwkphjMGP_PWKPhJ_P002488237.735821.5633
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P003109923.223611.6118mus_musculus_pwkphjMGP_PWKPhJ_P002488236.118618.0593
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P004215480.66372.6519mus_musculus_pwkphjMGP_PWKPhJ_P002488278.706270.8895

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P002488299.730599.7305mus_caroliMGP_CAROLIEiJ_P002352399.730599.7305
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0025856100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_ajMGP_AJ_P0025833100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_c3hhejMGP_C3HHeJ_P0025606100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_cbajMGP_CBAJ_P0025541100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_balbcjMGP_BALBcJ_P0025797100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_fvbnjMGP_FVBNJ_P0025648100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0026293100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0025651100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P002488299.730599.7305mus_pahariMGP_PahariEiJ_P008668499.730599.7305
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0026339100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_dba2jMGP_DBA2J_P0025655100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_casteijMGP_CASTEiJ_P0025170100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_akrjMGP_AKRJ_P0025794100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P002488294.339694.3396mus_spicilegusENSMSIP0000003512193.582993.5829
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P002488299.460999.4609rattus_norvegicusENSRNOP0000008231897.361597.3615
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_lpjMGP_LPJ_P0025770100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P002488299.730599.7305mus_spretusMGP_SPRETEiJ_P002467299.730599.7305
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculus_wsbeijMGP_WSBEiJ_P0025147100100
MGP_PWKPhJ_G0016505mus_musculus_pwkphjMGP_PWKPhJ_P0024882100100mus_musculusENSMUSP00000001148100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression