Description

Ensembl ID MGP_PWKPhJ_G0016456 Gene ID Accession -
Symbol Bicc1 Alias - Full Name BicC family RNA binding protein 1
Status Confidence Length 234192 bases Strand Minus strand
Position 10 : 67664104 - 67898295 RNA binding domain KH_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_PWKPhJ_P0024673 KH_1 PF00013 1.9e-38 1
MGP_PWKPhJ_P0024673 KH_1 PF00013 1.9e-38 2
MGP_PWKPhJ_P0024671 KH_1 PF00013 2.2e-38 1
MGP_PWKPhJ_P0024671 KH_1 PF00013 2.2e-38 2
MGP_PWKPhJ_P0024672 KH_1 PF00013 6.4e-37 1
MGP_PWKPhJ_P0024672 KH_1 PF00013 6.4e-37 2
MGP_PWKPhJ_P0024675 KH_1 PF00013 1e-31 1
MGP_PWKPhJ_P0024675 KH_1 PF00013 1e-31 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Bicc1-001 MGP_PWKPhJ_T0024671 5405 977aa MGP_PWKPhJ_P0024671"/note="transcript_id=MGP_PWKPhJ_T0024671
- MGP_PWKPhJ_T0024672 3005 869aa MGP_PWKPhJ_P0024672"/note="transcript_id=MGP_PWKPhJ_T0024672
- MGP_PWKPhJ_T0024673 3231 951aa MGP_PWKPhJ_P0024673"/note="transcript_id=MGP_PWKPhJ_T0024673
- MGP_PWKPhJ_T0024674 3048 No protein -
- MGP_PWKPhJ_T0024675 991 278aa MGP_PWKPhJ_P0024675"/note="transcript_id=MGP_PWKPhJ_T0024675

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P006514830.552116.5644mus_musculus_pwkphjMGP_PWKPhJ_P002467125.486213.8178
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P009686717.848.72mus_musculus_pwkphjMGP_PWKPhJ_P002467122.82511.1566
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P009686835.607715.3518mus_musculus_pwkphjMGP_PWKPhJ_P002467117.09317.3695
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002047319.637210.7256mus_musculus_pwkphjMGP_PWKPhJ_P002467125.486213.9202

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.692999.3859mus_caroliMGP_CAROLIEiJ_P002331799.692999.3859
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_129s1svimjMGP_129S1SvImJ_P002565099.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_ajMGP_AJ_P002562699.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_c3hhejMGP_C3HHeJ_P002540199.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_cbajMGP_CBAJ_P002533499.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_balbcjMGP_BALBcJ_P002559199.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_fvbnjMGP_FVBNJ_P002544499.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_c57bl6njMGP_C57BL6NJ_P002608699.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_nodshiltjMGP_NODShiLtJ_P002544599.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.181298.8741mus_pahariMGP_PahariEiJ_P008648599.181298.8741
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_nzohlltjMGP_NZOHlLtJ_P002613499.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_dba2jMGP_DBA2J_P002545099.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467110099.7953mus_musculus_casteijMGP_CASTEiJ_P002496210099.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_akrjMGP_AKRJ_P002558999.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467192.118791.8117mus_spicilegusENSMSIP0000003404594.637294.3218
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467198.362397.6459rattus_norvegicusENSRNOP0000000075498.061297.3469
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculus_lpjMGP_LPJ_P002556399.897699.7953
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.795399.6929mus_spretusMGP_SPRETEiJ_P002446499.795399.6929
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.795399.6929mus_musculus_wsbeijMGP_WSBEiJ_P002494299.795399.6929
MGP_PWKPhJ_G0016456mus_musculus_pwkphjMGP_PWKPhJ_P002467199.897699.7953mus_musculusENSMUSP0000012320199.897699.7953

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression