RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_PWKPhJ_G0016456 | Gene ID |
|
Accession |
- |
Symbol |
Bicc1 |
Alias |
- |
Full Name |
BicC family RNA binding protein 1 |
Status |
Confidence |
Length |
234192 bases |
Strand |
Minus strand |
Position |
10 : 67664104 - 67898295 |
RNA binding domain |
KH_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_PWKPhJ_P0024673 |
KH_1 |
PF00013 |
1.9e-38 |
1 |
MGP_PWKPhJ_P0024673 |
KH_1 |
PF00013 |
1.9e-38 |
2 |
MGP_PWKPhJ_P0024671 |
KH_1 |
PF00013 |
2.2e-38 |
1 |
MGP_PWKPhJ_P0024671 |
KH_1 |
PF00013 |
2.2e-38 |
2 |
MGP_PWKPhJ_P0024672 |
KH_1 |
PF00013 |
6.4e-37 |
1 |
MGP_PWKPhJ_P0024672 |
KH_1 |
PF00013 |
6.4e-37 |
2 |
MGP_PWKPhJ_P0024675 |
KH_1 |
PF00013 |
1e-31 |
1 |
MGP_PWKPhJ_P0024675 |
KH_1 |
PF00013 |
1e-31 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Bicc1-001 |
MGP_PWKPhJ_T0024671 |
5405 |
977aa |
MGP_PWKPhJ_P0024671"/note="transcript_id=MGP_PWKPhJ_T0024671 |
- |
MGP_PWKPhJ_T0024672 |
3005 |
869aa |
MGP_PWKPhJ_P0024672"/note="transcript_id=MGP_PWKPhJ_T0024672 |
- |
MGP_PWKPhJ_T0024673 |
3231 |
951aa |
MGP_PWKPhJ_P0024673"/note="transcript_id=MGP_PWKPhJ_T0024673 |
- |
MGP_PWKPhJ_T0024674 |
3048 |
No protein |
- |
- |
MGP_PWKPhJ_T0024675 |
991 |
278aa |
MGP_PWKPhJ_P0024675"/note="transcript_id=MGP_PWKPhJ_T0024675 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0065148 | 30.5521 | 16.5644 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 25.4862 | 13.8178 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0096867 | 17.84 | 8.72 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 22.825 | 11.1566 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0096868 | 35.6077 | 15.3518 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 17.0931 | 7.3695 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0020473 | 19.6372 | 10.7256 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 25.4862 | 13.9202 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.6929 | 99.3859 | mus_caroli | MGP_CAROLIEiJ_P0023317 | 99.6929 | 99.3859 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0025650 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_aj | MGP_AJ_P0025626 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_c3hhej | MGP_C3HHeJ_P0025401 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_cbaj | MGP_CBAJ_P0025334 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_balbcj | MGP_BALBcJ_P0025591 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_fvbnj | MGP_FVBNJ_P0025444 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0026086 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0025445 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.1812 | 98.8741 | mus_pahari | MGP_PahariEiJ_P0086485 | 99.1812 | 98.8741 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0026134 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_dba2j | MGP_DBA2J_P0025450 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 100 | 99.7953 | mus_musculus_casteij | MGP_CASTEiJ_P0024962 | 100 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_akrj | MGP_AKRJ_P0025589 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 92.1187 | 91.8117 | mus_spicilegus | ENSMSIP00000034045 | 94.6372 | 94.3218 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 98.3623 | 97.6459 | rattus_norvegicus | ENSRNOP00000000754 | 98.0612 | 97.3469 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus_lpj | MGP_LPJ_P0025563 | 99.8976 | 99.7953 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.7953 | 99.6929 | mus_spretus | MGP_SPRETEiJ_P0024464 | 99.7953 | 99.6929 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.7953 | 99.6929 | mus_musculus_wsbeij | MGP_WSBEiJ_P0024942 | 99.7953 | 99.6929 |
MGP_PWKPhJ_G0016456 | mus_musculus_pwkphj | MGP_PWKPhJ_P0024671 | 99.8976 | 99.7953 | mus_musculus | ENSMUSP00000123201 | 99.8976 | 99.7953 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |