Description

Ensembl ID MGP_NZOHlLtJ_G0030830 Gene ID Accession -
Symbol Ptcd1 Alias - Full Name pentatricopeptide repeat domain 1
Status Confidence Length 23733 bases Strand Minus strand
Position 5 : 148488032 - 148511764 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NZOHlLtJ_P0076557 PPR_3 PF13812 6.3e-29 1
MGP_NZOHlLtJ_P0076557 PPR_3 PF13812 6.3e-29 2
MGP_NZOHlLtJ_P0076557 PPR_3 PF13812 6.3e-29 3
MGP_NZOHlLtJ_P0076557 PPR_long PF17177 3.9e-19 4
MGP_NZOHlLtJ_P0076557 PPR PF01535 1.5e-17 5
MGP_NZOHlLtJ_P0076557 PPR PF01535 1.5e-17 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Ptcd1-001 MGP_NZOHlLtJ_T0076557 3082 695aa MGP_NZOHlLtJ_P0076557"/note="transcript_id=MGP_NZOHlLtJ_T0076557
- MGP_NZOHlLtJ_T0076558 273 20aa MGP_NZOHlLtJ_P0076558"/note="transcript_id=MGP_NZOHlLtJ_T0076558

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0030830

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0030830

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression