| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | MGP_NZOHlLtJ_G0030830 | Gene ID |
|
Accession |
- |
| Symbol |
Ptcd1 |
Alias |
- |
Full Name |
pentatricopeptide repeat domain 1 |
| Status |
Confidence |
Length |
23733 bases |
Strand |
Minus strand |
| Position |
5 : 148488032 - 148511764 |
RNA binding domain |
PPR_3 , PPR_long , PPR |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| MGP_NZOHlLtJ_P0076557 |
PPR_3 |
PF13812 |
6.3e-29 |
1 |
| MGP_NZOHlLtJ_P0076557 |
PPR_3 |
PF13812 |
6.3e-29 |
2 |
| MGP_NZOHlLtJ_P0076557 |
PPR_3 |
PF13812 |
6.3e-29 |
3 |
| MGP_NZOHlLtJ_P0076557 |
PPR_long |
PF17177 |
3.9e-19 |
4 |
| MGP_NZOHlLtJ_P0076557 |
PPR |
PF01535 |
1.5e-17 |
5 |
| MGP_NZOHlLtJ_P0076557 |
PPR |
PF01535 |
1.5e-17 |
6 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Ptcd1-001 |
MGP_NZOHlLtJ_T0076557 |
3082 |
695aa |
MGP_NZOHlLtJ_P0076557"/note="transcript_id=MGP_NZOHlLtJ_T0076557 |
| - |
MGP_NZOHlLtJ_T0076558 |
273 |
20aa |
MGP_NZOHlLtJ_P0076558"/note="transcript_id=MGP_NZOHlLtJ_T0076558 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_NZOHlLtJ_G0030830 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| MGP_NZOHlLtJ_G0030830 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |