RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_NZOHlLtJ_G0028611 | Gene ID |
|
Accession |
- |
Symbol |
Ddx58 |
Alias |
- |
Full Name |
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 |
Status |
Confidence |
Length |
39641 bases |
Strand |
Minus strand |
Position |
4 : 37661074 - 37700714 |
RNA binding domain |
ResIII , DEAD , RIG-I_C , RIG-I_C-RD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_NZOHlLtJ_P0065707 |
ResIII |
PF04851 |
3.3e-17 |
1 |
MGP_NZOHlLtJ_P0065707 |
DEAD |
PF00270 |
1.3e-16 |
2 |
MGP_NZOHlLtJ_P0065707 |
RIG-I_C |
PF18119 |
2.6e-38 |
3 |
MGP_NZOHlLtJ_P0065704 |
ResIII |
PF04851 |
5.5e-17 |
1 |
MGP_NZOHlLtJ_P0065704 |
DEAD |
PF00270 |
2.8e-16 |
2 |
MGP_NZOHlLtJ_P0065704 |
RIG-I_C |
PF18119 |
3.3e-38 |
3 |
MGP_NZOHlLtJ_P0065704 |
RIG-I_C-RD |
PF11648 |
3e-35 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
MGP_NZOHlLtJ_T0065702 |
386 |
No protein |
- |
- |
MGP_NZOHlLtJ_T0065703 |
3533 |
No protein |
- |
- |
MGP_NZOHlLtJ_T0065704 |
3874 |
926aa |
MGP_NZOHlLtJ_P0065704"/note="transcript_id=MGP_NZOHlLtJ_T0065704 |
- |
MGP_NZOHlLtJ_T0065705 |
422 |
No protein |
- |
- |
MGP_NZOHlLtJ_T0065706 |
756 |
No protein |
- |
- |
MGP_NZOHlLtJ_T0065707 |
2127 |
707aa |
MGP_NZOHlLtJ_P0065707"/note="transcript_id=MGP_NZOHlLtJ_T0065707 |
- |
MGP_NZOHlLtJ_T0065708 |
1641 |
No protein |
- |
- |
MGP_NZOHlLtJ_T0065709 |
1250 |
No protein |
- |
- |
MGP_NZOHlLtJ_T0065710 |
541 |
No protein |
- |
- |
MGP_NZOHlLtJ_T0065711 |
1607 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NZOHlLtJ_G0028611 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_NZOHlLtJ_G0028611 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |