Description

Ensembl ID MGP_NZOHlLtJ_G0028611 Gene ID Accession -
Symbol Ddx58 Alias - Full Name DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Status Confidence Length 39641 bases Strand Minus strand
Position 4 : 37661074 - 37700714 RNA binding domain ResIII , DEAD , RIG-I_C , RIG-I_C-RD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NZOHlLtJ_P0065707 ResIII PF04851 3.3e-17 1
MGP_NZOHlLtJ_P0065707 DEAD PF00270 1.3e-16 2
MGP_NZOHlLtJ_P0065707 RIG-I_C PF18119 2.6e-38 3
MGP_NZOHlLtJ_P0065704 ResIII PF04851 5.5e-17 1
MGP_NZOHlLtJ_P0065704 DEAD PF00270 2.8e-16 2
MGP_NZOHlLtJ_P0065704 RIG-I_C PF18119 3.3e-38 3
MGP_NZOHlLtJ_P0065704 RIG-I_C-RD PF11648 3e-35 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- MGP_NZOHlLtJ_T0065702 386 No protein -
- MGP_NZOHlLtJ_T0065703 3533 No protein -
- MGP_NZOHlLtJ_T0065704 3874 926aa MGP_NZOHlLtJ_P0065704"/note="transcript_id=MGP_NZOHlLtJ_T0065704
- MGP_NZOHlLtJ_T0065705 422 No protein -
- MGP_NZOHlLtJ_T0065706 756 No protein -
- MGP_NZOHlLtJ_T0065707 2127 707aa MGP_NZOHlLtJ_P0065707"/note="transcript_id=MGP_NZOHlLtJ_T0065707
- MGP_NZOHlLtJ_T0065708 1641 No protein -
- MGP_NZOHlLtJ_T0065709 1250 No protein -
- MGP_NZOHlLtJ_T0065710 541 No protein -
- MGP_NZOHlLtJ_T0065711 1607 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0028611

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0028611

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression