Description

Ensembl ID MGP_NZOHlLtJ_G0027268 Gene ID Accession -
Symbol Rprd1b Alias - Full Name regulation of nuclear pre-mRNA domain containing 1B
Status Confidence Length 114101 bases Strand Plus strand
Position 2 : 160970706 - 161084806 RNA binding domain CREPT , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NZOHlLtJ_P0059510 CREPT PF16566 6.1e-65 1
MGP_NZOHlLtJ_P0059510 CID PF04818 1.5e-36 2
MGP_NZOHlLtJ_P0059514 CREPT PF16566 6.1e-65 1
MGP_NZOHlLtJ_P0059514 CID PF04818 1.5e-36 2
MGP_NZOHlLtJ_P0059516 CREPT PF16566 3.6e-38 1
MGP_NZOHlLtJ_P0059517 CREPT PF16566 1.5e-37 1
MGP_NZOHlLtJ_P0059513 CREPT PF16566 1.9e-37 1
MGP_NZOHlLtJ_P0059513 CID PF04818 9.5e-37 2
MGP_NZOHlLtJ_P0059515 CREPT PF16566 9.2e-14 1
MGP_NZOHlLtJ_P0059515 CID PF04818 5.3e-37 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rprd1b-001 MGP_NZOHlLtJ_T0059510 4494 325aa MGP_NZOHlLtJ_P0059510"/note="transcript_id=MGP_NZOHlLtJ_T0059510
- MGP_NZOHlLtJ_T0059511 1597 No protein -
- MGP_NZOHlLtJ_T0059512 4169 No protein -
- MGP_NZOHlLtJ_T0059513 4389 294aa MGP_NZOHlLtJ_P0059513"/note="transcript_id=MGP_NZOHlLtJ_T0059513
- MGP_NZOHlLtJ_T0059514 4273 326aa MGP_NZOHlLtJ_P0059514"/note="transcript_id=MGP_NZOHlLtJ_T0059514
- MGP_NZOHlLtJ_T0059515 1910 224aa MGP_NZOHlLtJ_P0059515"/note="transcript_id=MGP_NZOHlLtJ_T0059515
- MGP_NZOHlLtJ_T0059516 764 193aa MGP_NZOHlLtJ_P0059516"/note="transcript_id=MGP_NZOHlLtJ_T0059516
- MGP_NZOHlLtJ_T0059517 428 142aa MGP_NZOHlLtJ_P0059517"/note="transcript_id=MGP_NZOHlLtJ_T0059517

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0027268

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0027268

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression