Description

Ensembl ID MGP_NZOHlLtJ_G0026973 Gene ID Accession -
Symbol Nop56 Alias - Full Name NOP56 ribonucleoprotein
Status Confidence Length 6359 bases Strand Plus strand
Position 2 : 131966947 - 131973305 RNA binding domain Nop , NOP5NT
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_NZOHlLtJ_P0058244 Nop PF01798 2.5e-82 1
MGP_NZOHlLtJ_P0058244 NOP5NT PF08156 2.6e-17 2
MGP_NZOHlLtJ_P0058241 Nop PF01798 3.1e-82 1
MGP_NZOHlLtJ_P0058241 NOP5NT PF08156 2.5e-17 2
MGP_NZOHlLtJ_P0058249 Nop PF01798 3.8e-30 1
MGP_NZOHlLtJ_P0058255 Nop PF01798 5.2e-20 1
MGP_NZOHlLtJ_P0058245 Nop PF01798 5e-16 1
MGP_NZOHlLtJ_P0058245 NOP5NT PF08156 1.7e-17 2
MGP_NZOHlLtJ_P0058246 NOP5NT PF08156 9.7e-18 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Nop56-001 MGP_NZOHlLtJ_T0058241 1610 522aa MGP_NZOHlLtJ_P0058241"/note="transcript_id=MGP_NZOHlLtJ_T0058241
- MGP_NZOHlLtJ_T0058242 3361 No protein -
- MGP_NZOHlLtJ_T0058243 2960 No protein -
- MGP_NZOHlLtJ_T0058244 1459 477aa MGP_NZOHlLtJ_P0058244"/note="transcript_id=MGP_NZOHlLtJ_T0058244
- MGP_NZOHlLtJ_T0058245 868 261aa MGP_NZOHlLtJ_P0058245"/note="transcript_id=MGP_NZOHlLtJ_T0058245
- MGP_NZOHlLtJ_T0058246 518 172aa MGP_NZOHlLtJ_P0058246"/note="transcript_id=MGP_NZOHlLtJ_T0058246
- MGP_NZOHlLtJ_T0058247 353 No protein -
- MGP_NZOHlLtJ_T0058248 320 No protein -
- MGP_NZOHlLtJ_T0058249 829 124aa MGP_NZOHlLtJ_P0058249"/note="transcript_id=MGP_NZOHlLtJ_T0058249
- MGP_NZOHlLtJ_T0058250 571 No protein -
- MGP_NZOHlLtJ_T0058251 741 No protein -
- MGP_NZOHlLtJ_T0058252 600 17aa MGP_NZOHlLtJ_P0058252"/note="transcript_id=MGP_NZOHlLtJ_T0058252
- MGP_NZOHlLtJ_T0058253 445 No protein -
- MGP_NZOHlLtJ_T0058254 833 No protein -
- MGP_NZOHlLtJ_T0058255 405 135aa MGP_NZOHlLtJ_P0058255"/note="transcript_id=MGP_NZOHlLtJ_T0058255

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0026973

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_NZOHlLtJ_G0026973

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression