RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_NZOHlLtJ_G0025489	Gene ID		Accession	-
Symbol	Rcl1	Alias	-	Full Name	RNA terminal phosphate cyclase-like 1
Status	Confidence	Length	42870 bases	Strand	Plus strand
Position	19 : 27123079 - 27165948	RNA binding domain	RTC_insert , RTC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_NZOHlLtJ_P0052033	RTC_insert	PF05189	4.4e-36	1
MGP_NZOHlLtJ_P0052033	RTC	PF01137	4.5e-62	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Rcl1-201	MGP_NZOHlLtJ_T0052033	1803	373aa	MGP_NZOHlLtJ_P0052033"/note="transcript_id=MGP_NZOHlLtJ_T0052033

Gene Model

Click here to download MGP_NZOHlLtJ_G0025489's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_NZOHlLtJ_G0025489's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0025489

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_NZOHlLtJ_G0025489

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression